iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007336

UUCD1 version

UUC-ArT-00817

Ensembl Protein ID

AT5G65920.1

UniProt Accession

Q9FHN9; O49529; Q8W4M3; PUB31_ARATH

Genbank Protein ID

BAB11139.1; CAA16672.1; AED98123.1; ANM68939.1; AAL32554.1; AAM13258.1

Protein Name

U-box domain-containing protein 31; Plant U-box protein 31; RING-type E3 ubiquitin transferase PUB31

Genbank Nucleotide ID

AB018108; AL021684; CP002688; CP002688; AY062476; AY093259

Gene Name

PUB31; At5g65920; F6H11.10; K14B20.9

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G65920	AT5G65920.1	AT5G65920.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.80e-28	98.7	59	130

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           e+p+ f+CpIsle+M+dPv+l++G+ty+rs+I kw++ g+ tcP+t+q+l ++ ++Pn+tl++li  w +++
   Q: 59   EIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTLHQLIYTWFSQK 130
           69******************************************************************9987 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Functions as an E3 ubiquitin ligase.

Protein Sequence
(Fasta)

MPMFQPSKNG GFDGHILDLH SAVKDGVLGG GDGKFLVVVT DEKKKLDLKE MISELELPEI 60
PSVFICPISL EPMQDPVTLC TGQTYERSNI LKWFNIGHCT CPTTMQELWD DLVTPNKTLH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCTTTTTAG TTTTTTCCCA GCAAAAAGAG TGAAAAAGAG AAAATCTTTG GTCCAAACCA 60
AAAGAAACGT TCCCTTTTTT TAATTTGTCT CTTTGCTTTA ATAATTTCCT TCTCACCGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

ath:AT5G65920

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005400	Arabidopsis lyrata	95.30	0.00e+00	837.00
IUUC-Bol-015369	Brassica oleracea	84.68	0.00e+00	747.00
IUUC-Bra-017891	Brassica rapa	83.78	0.00e+00	740.00
IUUC-Oba-075363	Oryza barthii	51.30	4.00e-102	363.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence