iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113958

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G422700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g039740	Sb01g039740.1	Sb01g039740.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.80e-07	31.0	218	259

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle     d +++lpC H+fh +C+  w       +++ +CP+C+
   Q: 218  CSVCLEQVavGDLLRSLPCLHQFHVNCIDPW------LRQQGTCPICK 259
           9*****996644499****************......**********7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSFVFRGSRA DIEAGGFPGF APERRAMRIH AGSRPVNSNS LAFLLTVLVL FMVLNSHQMS 60
PNLLLWLVLG VFLMATSLRM YATCQQLAHA AAANNFLGHT ELRVHVPPTI ALATRGRLQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTCTTTTC CCCATCTGCA GGCTGCAGGC GCTGCTGCTC TCGTCCTCCG CCAGCGACCG 60
AATCGCTGGC TCGACGCCGC GGCGGGAGGT TGGTATCTCG CCTTTCGATC AGGTGCGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0043231--C:intracellular membrane-bounded organelle
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0009789--P:positive regulation of abscisic acid-activated signaling pathway
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0009737--P:response to abscisic acid
GO:0009651--P:response to salt stress
GO:0009414--P:response to water deprivation

KEGG

sbi:SORBI_01g039740

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000396	Aegilops tauschii	64.31	5.00e-87	313.00
IUUC-Atr-002651	Amborella trichopoda	65.77	1.00e-79	288.00
IUUC-Apl-003834	Anas platyrhynchos	53.23	3.00e-16	79.70
IUUC-Aly-006305	Arabidopsis lyrata	66.67	1.00e-90	325.00
IUUC-Ath-007026	Arabidopsis thaliana	65.96	6.00e-89	319.00
IUUC-Ani-009201	Aspergillus nidulans	39.77	6.00e-11	62.40
IUUC-Ang-009613	Aspergillus niger	41.33	2.00e-12	66.60
IUUC-Ame-011435	Astyanax mexicanus	53.12	2.00e-14	72.80
IUUC-Bdi-015038	Brachypodium distachyon	81.18	1.00e-105	374.00
IUUC-Bol-015365	Brassica oleracea	66.42	2.00e-82	297.00
IUUC-Bra-017904	Brassica rapa	67.65	9.00e-83	298.00
IUUC-Cre-022982	Chlamydomonas reinhardtii	56.60	2.00e-13	69.30
IUUC-Cme-027166	Cyanidioschyzon merolae	28.80	7.00e-16	75.90
IUUC-Fal-036981	Ficedula albicollis	55.36	6.00e-16	78.60
IUUC-Fso-038141	Fusarium solani	31.16	2.00e-15	75.90
IUUC-Gga-041114	Gallus gallus	51.61	1.00e-15	77.80
IUUC-Gma-044260	Glycine max	67.63	2.00e-87	314.00
IUUC-Hvu-047764	Hordeum vulgare	81.21	2.00e-97	347.00
IUUC-Lpe-051371	Leersia perrieri	81.40	2.00e-107	381.00
IUUC-Mtr-058078	Medicago truncatula	67.63	2.00e-88	317.00
IUUC-Mdo-062162	Monodelphis domestica	53.85	5.00e-14	72.40
IUUC-Mac-065081	Musa acuminata	72.08	2.00e-93	334.00
IUUC-Mlu-067177	Myotis lucifugus	53.33	8.00e-14	71.20
IUUC-Oba-075903	Oryza barthii	69.35	4.00e-43	166.00
IUUC-Obr-076184	Oryza brachyantha	71.56	9.00e-95	339.00
IUUC-Ogl-076965	Oryza glaberrima	81.40	2.00e-107	380.00
IUUC-Ogu-078414	Oryza glumaepatula	73.33	6.00e-92	328.00
IUUC-Oin-079430	Oryza indica	81.40	2.00e-107	380.00
IUUC-Olo-080739	Oryza longistaminata	81.05	6.00e-107	379.00
IUUC-Ome-081538	Oryza meridionalis	81.40	1.00e-107	381.00
IUUC-Oni-082633	Oryza nivara	81.40	1.00e-107	382.00
IUUC-Opu-084125	Oryza punctata	81.40	1.00e-107	381.00
IUUC-Oru-085061	Oryza rufipogon	73.33	6.00e-92	328.00
IUUC-Osa-086209	Oryza sativa	81.40	2.00e-107	380.00
IUUC-Psi-093735	Pelodiscus sinensis	54.35	5.00e-15	75.50
IUUC-Ppa-095613	Physcomitrella patens	52.69	8.00e-57	212.00
IUUC-Pop-099911	Populus trichocarpa	67.02	1.00e-80	291.00
IUUC-Ppe-101792	Prunus persica	68.88	1.00e-94	338.00
IUUC-Sha-106681	Sarcophilus harrisii	53.85	5.00e-14	72.40
IUUC-Smo-109389	Selaginella moellendorffii	57.04	1.00e-67	248.00
IUUC-Sit-110587	Setaria italica	90.62	4.00e-22	95.10
IUUC-Sly-111915	Solanum lycopersicum	65.03	1.00e-86	311.00
IUUC-Stu-112568	Solanum tuberosum	58.60	2.00e-72	266.00
IUUC-Tca-121289	Theobroma cacao	68.42	5.00e-83	299.00
IUUC-Tae-125370	Triticum aestivum	79.64	4.00e-95	340.00
IUUC-Tur-125977	Triticum urartu	71.00	2.00e-86	311.00
IUUC-Vvi-131326	Vitis vinifera	68.77	2.00e-89	321.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence