iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mla-059135

Ensembl Protein ID

EGG01453

UniProt Accession

F4S1S7; F4S1S7_MELLP

Genbank Protein ID

EGG01453.1

Protein Name

tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Transfer RNA methyltransferase 82

Genbank Nucleotide ID

GL883138

Gene Name

TRM82; MELLADRAFT_117808

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MELLADRAFT_117808	EGG01453	EGG01453

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-07	30.5	219	259

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf......sdtllvsGsdDgtikvWDlrtgvll 36
           H+  v +l +      +++ l+sG++D  i+vWD+++ +l 
   Q: 219  HQRFVGALLWvpdnsgQTGVLISGGGDDEIYVWDVKEAKLK 259
           55556667789665332266**************9987766 PP

Organism

Melampsora laricipopulina

Functional Description
(View)

Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

Protein Sequence
(Fasta)

MRIPCQRLTR SADKKLLVIA SNAHLQVADL GNGQIISTHV SDPKSPNHTN GSHSGLIRLM 60
AIHQQKIEST GQTRSLLIST GEDKLLNTWE LPELRLLQSR ALSKRATALL ISPNGKHIVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGAATTC CTTGTCAAAG ATTAACAAGA AGTGCTGATA AGAAATTATT AGTAATAGCA 60
TCTAATGCTC ATCTTCAAGT AGCAGATTTA GGAAATGGTC AAATCATATC TACGCATGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0819--tRNA processing
KW-0853--WD repeat

Interpro

IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation

KEGG

mlr:MELLADRAFT_117808

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000556	Aegilops tauschii	25.12	3.00e-08	50.80
IUUC-Aly-005769	Arabidopsis lyrata	29.79	8.00e-19	85.90
IUUC-Ath-006733	Arabidopsis thaliana	28.71	2.00e-19	87.80
IUUC-Aor-010133	Aspergillus oryzae	31.78	1.00e-23	102.00
IUUC-Ame-010613	Astyanax mexicanus	28.41	7.00e-15	72.80
IUUC-Bdi-014458	Brachypodium distachyon	29.94	2.00e-12	64.70
IUUC-Bol-015373	Brassica oleracea	27.20	2.00e-19	89.00
IUUC-Bra-017059	Brassica rapa	27.20	3.00e-18	84.00
IUUC-Cne-026834	Cryptococcus neoformans	31.06	7.00e-23	99.80
IUUC-Dre-028427	Danio rerio	28.12	2.00e-13	68.60
IUUC-Gma-043722	Glycine max	26.59	5.00e-18	83.60
IUUC-Hvu-047643	Hordeum vulgare	26.61	4.00e-14	70.50
IUUC-Lpe-050712	Leersia perrieri	29.12	1.00e-17	82.00
IUUC-Mtr-058600	Medicago truncatula	29.49	1.00e-18	85.50
IUUC-Mvi-060359	Microbotryum violaceum	33.45	3.00e-32	131.00
IUUC-Mac-065625	Musa acuminata	25.37	9.00e-21	92.40
IUUC-Oba-075355	Oryza barthii	26.70	4.00e-10	57.40
IUUC-Obr-076769	Oryza brachyantha	26.75	2.00e-17	81.30
IUUC-Ogl-077168	Oryza glaberrima	28.63	2.00e-18	85.10
IUUC-Ogu-078275	Oryza glumaepatula	26.60	2.00e-09	55.50
IUUC-Oin-079207	Oryza indica	28.63	2.00e-18	85.10
IUUC-Oni-082437	Oryza nivara	26.70	7.00e-10	56.60
IUUC-Opu-084031	Oryza punctata	28.22	8.00e-19	86.30
IUUC-Oru-084380	Oryza rufipogon	26.70	4.00e-10	57.40
IUUC-Osa-085327	Oryza sativa	28.63	2.00e-18	84.70
IUUC-Ola-086716	Oryzias latipes	28.40	1.00e-15	75.10
IUUC-Olu-087708	Ostreococcus lucimarinus	24.62	1.00e-11	62.00
IUUC-Ppa-095757	Physcomitrella patens	24.43	2.00e-12	64.70
IUUC-Pop-098979	Populus trichocarpa	28.78	6.00e-21	93.20
IUUC-Ppe-101515	Prunus persica	28.11	1.00e-21	95.50
IUUC-Sja-107780	Schizosaccharomyces japonicus	27.72	4.00e-23	100.00
IUUC-Spo-108251	Schizosaccharomyces pombe	32.84	1.00e-28	118.00
IUUC-Smo-108938	Selaginella moellendorffii	30.96	2.00e-19	88.60
IUUC-Sit-110020	Setaria italica	28.64	1.00e-17	82.00
IUUC-Sly-111543	Solanum lycopersicum	33.66	7.00e-25	106.00
IUUC-Stu-111925	Solanum tuberosum	31.62	8.00e-25	105.00
IUUC-Sbi-114061	Sorghum bicolor	27.39	1.00e-18	85.90
IUUC-Tca-121746	Theobroma cacao	31.25	8.00e-22	95.90
IUUC-Tae-124459	Triticum aestivum	27.19	3.00e-15	74.30
IUUC-Vvi-131428	Vitis vinifera	29.37	2.00e-22	97.80
IUUC-Xma-133605	Xiphophorus maculatus	27.00	4.00e-14	70.50

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence