iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080400

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN539025.1_FG014	KN539025.1_FGT014	KN539025.1_FGP014

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.50e-06	28.5	173	214

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cledf   ++ + +pC+H fh +C+  w         + +CP+Cr
   Q: 173  CSVCLEDFemGTEAKEMPCQHKFHSQCILPW------LELHSSCPICR 214
           ********76333778***************......**********8 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MEQGQGDRYW CHHCEEVIEP VEPDMKCPSC DSGFVEEMGS AGFEPSTNLR DSDRDRERER 60
RERERLRERE RERERMRERE RERRRERTES LILINSNNEA IILQGTFGPD DNQDDSSNTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAACAAG GTCAGGGAGA TAGATATTGG TGCCACCACT GCGAGGAAGT GATTGAACCC 60
GTGGAGCCTG ATATGAAGTG TCCTAGCTGT GACAGCGGGT TCGTGGAAGA GATGGGGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001123	Aegilops tauschii	73.16	3.00e-72	264.00
IUUC-Bdi-014762	Brachypodium distachyon	74.13	1.00e-66	245.00
IUUC-Lpe-051411	Leersia perrieri	85.80	2.00e-76	278.00
IUUC-Mac-064948	Musa acuminata	50.91	7.00e-44	169.00
IUUC-Oba-075441	Oryza barthii	100.00	3.00e-86	311.00
IUUC-Obr-076715	Oryza brachyantha	94.39	1.00e-90	325.00
IUUC-Ogl-077359	Oryza glaberrima	100.00	3.00e-86	311.00
IUUC-Ogu-078243	Oryza glumaepatula	99.39	6.00e-86	310.00
IUUC-Oin-079349	Oryza indica	99.39	4.00e-85	307.00
IUUC-Ome-081311	Oryza meridionalis	99.39	2.00e-93	334.00
IUUC-Oni-082403	Oryza nivara	99.39	1.00e-85	308.00
IUUC-Oru-085092	Oryza rufipogon	100.00	5.00e-86	310.00
IUUC-Osa-085947	Oryza sativa	99.39	4.00e-85	307.00
IUUC-Pop-099555	Populus trichocarpa	66.67	5.00e-49	187.00
IUUC-Pyt-104819	Pyrenophora triticirepentis	45.76	2.00e-13	69.70
IUUC-Sit-110067	Setaria italica	64.42	3.00e-37	148.00
IUUC-Sly-110912	Solanum lycopersicum	53.55	6.00e-49	186.00
IUUC-Sbi-114729	Sorghum bicolor	79.60	8.00e-83	299.00
IUUC-Tru-118087	Takifugu rubripes	44.86	9.00e-21	92.80
IUUC-Tur-126272	Triticum urartu	75.36	6.00e-82	296.00
IUUC-Vvi-131512	Vitis vinifera	66.92	1.00e-49	189.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence