iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__2505__AT5G64740.1	fgenesh2_kg.8__2505__AT5G64740.1	fgenesh2_kg.8__2505__AT5G64740.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	98.08	0.00e+00	2057.00	IUUC-Ath-007200

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MNTGGRLIAG SHNRNEFVLI NADENARIRS VQELSGQTCQ ICRDEIELTV DGEPFVACNE 60
CAFPVCRPCY EYERREGNQA CPQCKTRFKR LKGSPRVEGD EEEDDIDDLD NEFEYGNNGI 120

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Nucleotide Sequence
(Fasta)

TGATTCTCTT CTTCCTTACG CGTCTGTACT TAACCCCTTT TATCATCATT TCGCAGGCTT 60
GCGTCTCTCT CTCTCTCGCT CTGGAATCAT CCTTTATTTC TGTGACTGTG TGCACTTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-1003--Cell membrane
KW-0961--Cell wall biogenesis/degradation
KW-0135--Cellulose biosynthesis
KW-0181--Complete proteome
KW-0328--Glycosyltransferase
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR005150--Cellulose_synth
IPR027934--CES_Znf_RING
IPR029044--Nucleotide-diphossugar_trans
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF03552--Cellulose_synt
PF14569--zf-UDP

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0016760--F:cellulose synthase (UDP-forming) activity
GO:0008270--F:zinc ion binding
GO:0071555--P:cell wall organization
GO:0030244--P:cellulose biosynthetic process

KEGG

aly:ARALYDRAFT_496689

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002872	Amborella trichopoda	75.61	0.00e+00	1610.00
IUUC-Ath-007200	Arabidopsis thaliana	98.08	0.00e+00	2053.00
IUUC-Bdi-014640	Brachypodium distachyon	70.40	0.00e+00	1511.00
IUUC-Bol-015078	Brassica oleracea	94.69	0.00e+00	2019.00
IUUC-Bra-016987	Brassica rapa	94.14	0.00e+00	2003.00
IUUC-Cfa-020301	Canis familiaris	30.95	1.10e-02	36.20
IUUC-Cre-022912	Chlamydomonas reinhardtii	33.96	1.00e-09	55.10
IUUC-Gma-044160	Glycine max	81.00	0.00e+00	1768.00
IUUC-Lpe-051438	Leersia perrieri	70.89	0.00e+00	1501.00
IUUC-Mtr-058076	Medicago truncatula	80.65	0.00e+00	1727.00
IUUC-Mac-064824	Musa acuminata	70.22	0.00e+00	1488.00
IUUC-Oba-075067	Oryza barthii	70.32	0.00e+00	1498.00
IUUC-Obr-076190	Oryza brachyantha	70.06	0.00e+00	1496.00
IUUC-Ogl-077612	Oryza glaberrima	70.32	0.00e+00	1498.00
IUUC-Ogu-078695	Oryza glumaepatula	70.41	0.00e+00	1499.00
IUUC-Oin-079596	Oryza indica	70.32	0.00e+00	1499.00
IUUC-Olo-080926	Oryza longistaminata	67.82	0.00e+00	1462.00
IUUC-Ome-081460	Oryza meridionalis	70.50	0.00e+00	1502.00
IUUC-Oni-082402	Oryza nivara	70.41	0.00e+00	1499.00
IUUC-Opu-083289	Oryza punctata	70.50	0.00e+00	1503.00
IUUC-Oru-084288	Oryza rufipogon	70.41	0.00e+00	1499.00
IUUC-Osa-085968	Oryza sativa	70.32	0.00e+00	1499.00
IUUC-Ppa-096023	Physcomitrella patens	65.79	0.00e+00	1297.00
IUUC-Pop-099619	Populus trichocarpa	83.11	0.00e+00	1756.00
IUUC-Ppe-101630	Prunus persica	81.65	0.00e+00	1758.00
IUUC-Sit-110573	Setaria italica	69.77	0.00e+00	1495.00
IUUC-Sly-111088	Solanum lycopersicum	77.00	0.00e+00	1615.00
IUUC-Stu-112367	Solanum tuberosum	77.11	0.00e+00	1623.00
IUUC-Sbi-114064	Sorghum bicolor	69.84	0.00e+00	1492.00
IUUC-Vvi-131287	Vitis vinifera	79.11	0.00e+00	1642.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence