iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114727

Ensembl Protein ID

Sb01g001010.1

UniProt Accession

A0A1B6QGQ9; A0A1B6QGQ9_SORBI

Genbank Protein ID

KXG37112.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G010300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g001010	Sb01g001010.1	Sb01g001010.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-13	51.2	468	491

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 10   af.sd.tllvsGsdDgtikvWDlr 31
           ++ +d ++++sGs D +i+++D+r
   Q: 468  SWsPDgWYVSSGSADPVIHIFDIR 491
           599999****************87 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGDPPALKRP KLEKDDNGST YCPCPASNGE DDDISEEAVV ALIAHRERDV ERCKLKLLHY 60
QSLLDTAEMK LEEAQSRLAR FRDRKPPTTR SEPKLPTPPI HRDPKPSPPP IQRDLKPSPQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGACC CGCCGGCGCT CAAGAGGCCC AAGCTCGAGA AGGACGACAA CGGTTCCACC 60
TACTGCCCCT GCCCCGCCTC CAATGGCGCG GGCGCCGCCG CCGCCAGTGG GGCGCCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000679	Aegilops tauschii	71.09	2.00e-164	571.00
IUUC-Atr-002878	Amborella trichopoda	59.76	1.00e-125	442.00
IUUC-Aly-006473	Arabidopsis lyrata	49.20	4.00e-135	474.00
IUUC-Ath-006806	Arabidopsis thaliana	62.22	7.00e-134	469.00
IUUC-Bdi-014216	Brachypodium distachyon	66.07	0.00e+00	662.00
IUUC-Bol-015463	Brassica oleracea	49.80	4.00e-135	474.00
IUUC-Bra-017074	Brassica rapa	60.91	2.00e-133	468.00
IUUC-Gma-042665	Glycine max	51.94	5.00e-147	513.00
IUUC-Hvu-047292	Hordeum vulgare	76.57	2.00e-136	477.00
IUUC-Lpe-051627	Leersia perrieri	70.66	0.00e+00	684.00
IUUC-Mtr-058789	Medicago truncatula	52.39	9.00e-138	482.00
IUUC-Mac-065472	Musa acuminata	58.41	2.00e-166	578.00
IUUC-Oba-074995	Oryza barthii	67.14	4.00e-179	620.00
IUUC-Obr-076006	Oryza brachyantha	74.37	0.00e+00	775.00
IUUC-Ogl-077176	Oryza glaberrima	72.11	0.00e+00	693.00
IUUC-Ogu-078267	Oryza glumaepatula	71.35	0.00e+00	696.00
IUUC-Oin-079742	Oryza indica	70.57	1.00e-180	625.00
IUUC-Olo-080890	Oryza longistaminata	77.91	8.00e-162	562.00
IUUC-Ome-081454	Oryza meridionalis	72.89	0.00e+00	692.00
IUUC-Oni-083009	Oryza nivara	69.64	0.00e+00	680.00
IUUC-Opu-083781	Oryza punctata	82.03	6.00e-175	605.00
IUUC-Oru-084517	Oryza rufipogon	69.64	0.00e+00	680.00
IUUC-Osa-085484	Oryza sativa	81.32	2.00e-176	610.00
IUUC-Ppa-095859	Physcomitrella patens	50.43	1.00e-96	345.00
IUUC-Pop-099647	Populus trichocarpa	49.90	9.00e-144	502.00
IUUC-Ppe-101833	Prunus persica	51.27	4.00e-147	513.00
IUUC-Smo-109600	Selaginella moellendorffii	37.85	1.00e-43	168.00
IUUC-Sit-109887	Setaria italica	90.20	0.00e+00	710.00
IUUC-Sly-111601	Solanum lycopersicum	49.74	2.00e-149	521.00
IUUC-Stu-112708	Solanum tuberosum	61.36	5.00e-128	450.00
IUUC-Tca-121644	Theobroma cacao	51.79	3.00e-141	494.00
IUUC-Tae-123256	Triticum aestivum	62.75	8.00e-179	619.00
IUUC-Vvi-131460	Vitis vinifera	52.23	1.00e-146	512.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence