iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098817

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_847758; POPTR_0001s31240g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s31240	POPTR_0001s31240.1	POPTR_0001s31240.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-07	32.6	688	729

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++   +d   + +CgH fh++C+++w       +++ +CP+C+
   Q: 688  CCICQEEYvdgDD-MGIIDCGHDFHTNCIKQW------LMQKNLCPICK 729
           ********77555.8899**************......9*********6 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQRQKAAFHS FSETIDFDQG SVSNSTVMSQ QTPFSNMLNP VDSRLSNNAV SSGNASCSNA 60
LTHDVQSFSG WNSGESSSRL SLQNQVNDDG IKMEEWLSTS VNAYPAVGQR SEERLFETTN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGAAGGTTG AGGACATGCT TAAATGCATC TGGTCCTGTT GTTGGCATTG AAACAAGCTG 60
TTACGTCCTC ATAGGCGATG CTGATAAGTG CATAACGTGA ACCACATTTT CCACCAAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s31240g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000325	Aegilops tauschii	59.18	3.00e-47	183.00
IUUC-Aly-005960	Arabidopsis lyrata	40.85	1.00e-100	360.00
IUUC-Ath-007241	Arabidopsis thaliana	42.98	1.00e-114	406.00
IUUC-Bra-017872	Brassica rapa	41.15	2.00e-81	295.00
IUUC-Gmo-038696	Gadus morhua	30.15	2.00e-12	67.40
IUUC-Gac-041830	Gasterosteus aculeatus	29.63	4.00e-14	73.20
IUUC-Gma-044405	Glycine max	46.88	3.00e-150	525.00
IUUC-Hvu-047680	Hordeum vulgare	58.89	8.00e-56	211.00
IUUC-Lpe-051474	Leersia perrieri	53.63	5.00e-49	188.00
IUUC-Loc-052174	Lepisosteus oculatus	34.40	7.00e-14	72.40
IUUC-Mtr-057919	Medicago truncatula	46.41	1.00e-112	399.00
IUUC-Oba-075898	Oryza barthii	53.33	1.00e-48	187.00
IUUC-Obr-076185	Oryza brachyantha	53.33	5.00e-48	185.00
IUUC-Ogl-077587	Oryza glaberrima	53.33	1.00e-48	187.00
IUUC-Ogu-078729	Oryza glumaepatula	53.33	1.00e-48	187.00
IUUC-Oin-079127	Oryza indica	53.33	1.00e-48	187.00
IUUC-Olo-080490	Oryza longistaminata	53.33	1.00e-48	187.00
IUUC-Oni-082106	Oryza nivara	53.33	1.00e-48	187.00
IUUC-Opu-084108	Oryza punctata	53.63	1.00e-48	187.00
IUUC-Oru-085229	Oryza rufipogon	53.33	1.00e-48	187.00
IUUC-Osa-085404	Oryza sativa	53.33	1.00e-48	187.00
IUUC-Ppe-101866	Prunus persica	53.64	3.00e-170	591.00
IUUC-Sit-110290	Setaria italica	56.65	1.00e-52	201.00
IUUC-Sbi-113819	Sorghum bicolor	56.40	1.00e-52	200.00
IUUC-Tru-118054	Takifugu rubripes	32.06	1.00e-12	68.60
IUUC-Tca-121420	Theobroma cacao	60.32	0.00e+00	691.00
IUUC-Tae-123230	Triticum aestivum	54.91	7.00e-50	191.00
IUUC-Tur-126323	Triticum urartu	54.91	5.00e-50	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence