iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078226

Ensembl Protein ID

OGLUM04G09230.1

UniProt Accession

A0A0D9ZJM7; A0A0D9ZJM7_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM04G09230	OGLUM04G09230.1	OGLUM04G09230.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.10e-18	66.0	234	306

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vpe+flCpIs+++M +Pvv++sG t++  ++ekw +++++ cPvt++ l+++ ++Pn+ +      w+ +n++
   Q: 234  VPEFFLCPISNKVMVNPVVISSGKTVEVLALEKWWSENRRLCPVTDEILDNSIFIPNILIMLCTALWRTRNGI 306
           8*********************************************************999888889888875 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MSPSMPQPLP LPSPPSSPRS GATTTTTTSV RARPRPPTAP PDVPWLARSG GGAGSSDVAG 60
SSSGSGSNVD ETLAAMRDAA WARFYAVMGK GKGKAGERGS FSFPDLGAPH DVVDAAAVVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGCCGT CAATGCCGCA GCCGCTGCCG CTGCCGTCGC CGCCGTCGAG CCCCCGTTCT 60
GGCGCCACCA CCACCACCAC CACCTCGGTG CGGGCGCGTC CGAGACCACC GACGGCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001015	Aegilops tauschii	48.10	2.00e-136	479.00
IUUC-Bdi-014181	Brachypodium distachyon	59.93	4.00e-175	607.00
IUUC-Hvu-047192	Hordeum vulgare	58.80	9.00e-160	556.00
IUUC-Lpe-051723	Leersia perrieri	73.51	0.00e+00	675.00
IUUC-Oba-075695	Oryza barthii	99.49	0.00e+00	1056.00
IUUC-Obr-076271	Oryza brachyantha	75.74	0.00e+00	660.00
IUUC-Ogl-077902	Oryza glaberrima	99.32	0.00e+00	1077.00
IUUC-Oin-079808	Oryza indica	99.20	0.00e+00	924.00
IUUC-Olo-080703	Oryza longistaminata	97.64	0.00e+00	724.00
IUUC-Ome-081157	Oryza meridionalis	97.68	0.00e+00	1055.00
IUUC-Oni-082070	Oryza nivara	99.82	0.00e+00	1056.00
IUUC-Opu-083808	Oryza punctata	91.47	0.00e+00	919.00
IUUC-Oru-085024	Oryza rufipogon	99.82	0.00e+00	1056.00
IUUC-Sit-109991	Setaria italica	54.16	2.00e-136	478.00
IUUC-Sbi-114496	Sorghum bicolor	51.21	4.00e-137	481.00
IUUC-Tae-124210	Triticum aestivum	58.56	1.00e-169	589.00
IUUC-Tur-126074	Triticum urartu	57.98	2.00e-155	541.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence