iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT	UniProt
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/UBX	1.60e-13	51.8	227	301

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/UBX

   S: 3    teqatlqiRlpdGkrlvrkFpssttleqiyqfveyllvessdpFeLvs.pfPrrtlkpeehmstlqeagLvpsgsll 78
            +++ +q+Rl+dG rlv kF++ +t+++i+ f++ ++   s +++L + +fP ++l++ ++  t++eagL++s +l+
   Q: 227  VPTTSIQLRLADGTRLVAKFNHHHTVNDIRGFIDSSRPGASLNYQLQTmGFPPKPLTDLTQ--TIEEAGLANSVVLQ 301
           56899*****************************************8846***********..**********9985 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSSKDKKPSK PSSSRGGIRT LSDLNRRSGP DSDSDSDGPQ EYYTGGEKSG MLVQDPSKKD 60
DVDEIFNQAR QLGAVEGPLE PPPSSRSFTG TGRLLSGENV PTGNQQPEPV VHNIVFWSNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAACTATAAT TATTAGTTAA TAAATCGTAA CCGTAATAAC CGTAACCTTA GTGATGCCTA 60
AATTCTCTCA TTAAAGCGTA GATAAACCGG TGTTAAACCA TGAAACCATG AGATTTTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR012989--SEP_domain
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS51399--SEP
PS50033--UBX

Pfam

PF08059--SEP
PF00789--UBX

SMART

SM00553--SEP
SM00166--UBX

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0051117--F:ATPase binding
GO:0043130--F:ubiquitin binding
GO:0007030--P:Golgi organization
GO:0061025--P:membrane fusion
GO:0031468--P:nuclear envelope reassembly
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT4G04210

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000550	Aegilops tauschii	56.88	1.00e-73	268.00
IUUC-Aml-001637	Ailuropoda melanoleuca	37.68	2.00e-36	145.00
IUUC-Apl-003388	Anas platyrhynchos	35.31	5.00e-35	140.00
IUUC-Aca-005210	Anolis carolinensis	36.84	2.00e-35	142.00
IUUC-Aly-005499	Arabidopsis lyrata	92.48	1.00e-140	491.00
IUUC-Acl-008176	Aspergillus clavatus	33.33	1.00e-28	120.00
IUUC-Afl-008553	Aspergillus flavus	31.05	2.00e-25	109.00
IUUC-Aor-010016	Aspergillus oryzae	32.04	1.00e-24	107.00
IUUC-Ame-011089	Astyanax mexicanus	36.82	3.00e-34	138.00
IUUC-Bta-012629	Bos taurus	36.43	1.00e-35	143.00
IUUC-Bdi-014746	Brachypodium distachyon	57.55	2.00e-88	318.00
IUUC-Bol-016173	Brassica oleracea	83.22	8.00e-122	429.00
IUUC-Bra-017734	Brassica rapa	83.62	7.00e-115	405.00
IUUC-Cel-018169	Caenorhabditis elegans	29.31	6.00e-18	84.00
IUUC-Cja-018993	Callithrix jacchus	35.82	1.00e-35	143.00
IUUC-Cfa-021132	Canis familiaris	37.86	1.00e-36	146.00
IUUC-Cpo-021389	Cavia porcellus	37.10	3.00e-36	144.00
IUUC-Csa-023244	Chlorocebus sabaeus	35.92	3.00e-36	145.00
IUUC-Dre-028748	Danio rerio	36.81	1.00e-32	133.00
IUUC-Dno-029956	Dasypus novemcinctus	36.62	3.00e-34	138.00
IUUC-Dor-030203	Dipodomys ordii	36.24	2.00e-34	138.00
IUUC-Dme-031878	Drosophila melanogaster	31.93	4.00e-31	128.00
IUUC-Ete-032997	Echinops telfairi	36.93	3.00e-34	138.00
IUUC-Eca-034063	Equus caballus	38.16	5.00e-36	144.00
IUUC-Eeu-035097	Erinaceus europaeus	31.97	4.00e-07	48.50
IUUC-Fca-035606	Felis catus	38.03	3.00e-36	145.00
IUUC-Fal-037100	Ficedula albicollis	36.18	1.00e-34	139.00
IUUC-Gmo-039429	Gadus morhua	34.26	6.00e-32	130.00
IUUC-Ggr-039971	Gaeumannomyces graminis	25.83	5.00e-13	68.60
IUUC-Gga-040864	Gallus gallus	36.01	6.00e-35	140.00
IUUC-Gac-041589	Gasterosteus aculeatus	34.03	5.00e-34	137.00
IUUC-Gma-043511	Glycine max	70.13	4.00e-105	373.00
IUUC-Ggo-044601	Gorilla gorilla	35.82	8.00e-36	143.00
IUUC-Hsa-045773	Homo sapiens	35.92	3.00e-36	145.00
IUUC-Hvu-047203	Hordeum vulgare	54.30	9.00e-71	259.00
IUUC-Itr-047910	Ictidomys tridecemlineatus	38.21	1.00e-36	145.00
IUUC-Kpa-049322	Komagataella pastoris	28.87	4.00e-21	94.70
IUUC-Lch-050608	Latimeria chalumnae	37.19	5.00e-36	144.00
IUUC-Lpe-050944	Leersia perrieri	57.33	2.00e-76	279.00
IUUC-Loc-052555	Lepisosteus oculatus	36.59	8.00e-34	137.00
IUUC-Lma-053319	Leptosphaeria maculans	31.55	9.00e-26	110.00
IUUC-Laf-053854	Loxodonta africana	35.79	3.00e-32	131.00
IUUC-Mcc-055472	Macaca mulatta	35.82	7.00e-36	143.00
IUUC-Meu-056093	Macropus eugenii	40.56	2.00e-21	95.90
IUUC-Mtr-057665	Medicago truncatula	69.26	2.00e-106	377.00
IUUC-Mga-059836	Meleagris gallopavo	36.01	6.00e-35	140.00
IUUC-Mvi-060292	Microbotryum violaceum	32.43	5.00e-32	131.00
IUUC-Mmr-061091	Microcebus murinus	37.63	2.00e-36	145.00
IUUC-Mdo-062985	Monodelphis domestica	35.94	7.00e-36	143.00
IUUC-Mmu-064382	Mus musculus	36.50	9.00e-35	140.00
IUUC-Mac-065403	Musa acuminata	67.11	3.00e-99	354.00
IUUC-Mpu-066168	Mustela putorius furo	37.68	9.00e-37	146.00
IUUC-Mlu-067562	Myotis lucifugus	36.75	7.00e-35	140.00
IUUC-Nle-069169	Nomascus leucogenys	36.49	2.00e-36	145.00
IUUC-Opr-070979	Ochotona princeps	35.42	7.00e-36	143.00
IUUC-Ont-071803	Oreochromis niloticus	34.72	3.00e-36	145.00
IUUC-Oan-073007	Ornithorhynchus anatinus	35.27	2.00e-36	145.00
IUUC-Ocu-074276	Oryctolagus cuniculus	37.54	3.00e-36	144.00
IUUC-Oba-075011	Oryza barthii	57.05	1.00e-79	288.00
IUUC-Ogl-077805	Oryza glaberrima	57.05	1.00e-79	288.00
IUUC-Ogu-078942	Oryza glumaepatula	56.86	2.00e-79	288.00
IUUC-Oin-079497	Oryza indica	51.83	1.00e-74	272.00
IUUC-Olo-080962	Oryza longistaminata	50.20	5.00e-72	263.00
IUUC-Ome-081766	Oryza meridionalis	53.46	2.00e-77	283.00
IUUC-Oni-082258	Oryza nivara	57.05	1.00e-79	288.00
IUUC-Opu-083331	Oryza punctata	56.67	3.00e-77	282.00
IUUC-Oru-084748	Oryza rufipogon	57.05	2.00e-79	288.00
IUUC-Osa-085359	Oryza sativa	57.05	1.00e-79	288.00
IUUC-Oga-088533	Otolemur garnettii	36.49	1.00e-35	142.00
IUUC-Oar-090236	Ovis aries	36.43	9.00e-35	139.00
IUUC-Ptr-090926	Pan troglodytes	35.92	3.00e-36	145.00
IUUC-Pan-092100	Papio anubis	35.92	3.00e-36	145.00
IUUC-Psi-093486	Pelodiscus sinensis	34.04	1.00e-35	142.00
IUUC-Pma-094475	Petromyzon marinus	35.11	2.00e-32	131.00
IUUC-Pfo-096193	Poecilia formosa	33.91	2.00e-34	139.00
IUUC-Pab-097971	Pongo abelii	35.92	3.00e-36	145.00
IUUC-Pop-099170	Populus trichocarpa	75.08	3.00e-119	420.00
IUUC-Pca-100985	Procavia capensis	52.38	2.00e-18	85.50
IUUC-Pva-102504	Pteropus vampyrus	36.59	1.00e-34	139.00
IUUC-Pyt-104504	Pyrenophora triticirepentis	30.50	1.00e-29	123.00
IUUC-Rno-105448	Rattus norvegicus	36.33	1.00e-34	139.00
IUUC-Sce-106457	Saccharomyces cerevisiae	29.93	2.00e-22	99.40
IUUC-Sha-106777	Sarcophilus harrisii	34.62	2.00e-11	61.60
IUUC-Sit-110328	Setaria italica	57.33	4.00e-81	294.00
IUUC-Sly-111135	Solanum lycopersicum	65.16	3.00e-99	354.00
IUUC-Stu-112733	Solanum tuberosum	64.46	1.00e-98	352.00
IUUC-Sbi-114761	Sorghum bicolor	54.18	1.00e-73	269.00
IUUC-Ssc-115936	Sus scrofa	37.14	1.00e-35	143.00
IUUC-Tgu-117238	Taeniopygia guttata	36.52	6.00e-36	144.00
IUUC-Tru-118521	Takifugu rubripes	36.24	1.00e-37	149.00
IUUC-Tsy-119015	Tarsius syrichta	39.06	2.00e-31	128.00
IUUC-Tni-119705	Tetraodon nigroviridis	35.21	2.00e-34	139.00
IUUC-Tae-124970	Triticum aestivum	56.19	9.00e-84	302.00
IUUC-Tur-126464	Triticum urartu	52.90	1.00e-62	232.00
IUUC-Tme-127193	Tuber melanosporum	34.59	2.00e-34	139.00
IUUC-Tbe-127716	Tupaia belangeri	35.31	6.00e-33	133.00
IUUC-Ttr-128760	Tursiops truncatus	37.50	2.00e-36	145.00
IUUC-Vpa-130155	Vicugna pacos	36.43	2.00e-34	138.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence