iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113908

UUCD1 version

UUC-SoB-01012

Ensembl Protein ID

Sb06g020920.1

UniProt Accession

A0A1B6PLR1; A0A1B6PLR1_SORBI

Genbank Protein ID

KXG26611.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G129300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g020920	Sb06g020920.1	Sb06g020920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.70e-09	37.4	332	382

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadC.......lqkwpglknssskefrCPlCr 46
           C+ C++++   ++ +++l+C Hvfh          + +w     ++s   +CP+Cr
   Q: 332  CIMCQDSMeagEK-VRTLSCDHVFHYGAtarcqndIDQW----LLTSEDMSCPICR 382
           9*******66444.**************66666666999....8899********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MATFVYKYPR DGNAMPPPCK HANASEQEGK PRAREGERRR GKTRSKEGEE ERRKEMAADI 60
GYYWLVAIPV RVVLGVVLAV ITLVVIVVVA FIVFVCATNF RAWWRSPRMR LLRLGGVTTL 120

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Nucleotide Sequence
(Fasta)

ATGGCCACCT TCGTCTACAA ATACCCACGA GACGGCAATG CCATGCCACC ACCTTGCAAA 60
CACGCGAACG CGAGCGAACA AGAAGGGAAG CCAAGAGCAC GAGAGGGCGA GAGGAGGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Oba-075272	Oryza barthii	44.74	3.00e-11	60.50
IUUC-Ogl-077219	Oryza glaberrima	47.37	1.00e-11	61.60
IUUC-Ogu-078804	Oryza glumaepatula	44.83	6.00e-15	71.60
IUUC-Oin-079186	Oryza indica	41.86	3.00e-11	60.10
IUUC-Olo-080924	Oryza longistaminata	42.24	3.00e-13	67.40
IUUC-Ome-081798	Oryza meridionalis	44.83	6.00e-15	71.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence