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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Rno-105096
UUCD1 version UUC-RaN-01051
Ensembl Protein ID ENSRNOP00000012842.4
UniProt Accession D4ABI6; F1LM67; D4ABI6_RAT
Genbank Protein ID ENSRNOP00000012842
Protein Name Ubiquitin carboxyl-terminal hydrolase
Genbank Nucleotide ID AABR07019062
Gene Name RGD1561252; Uchl3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000009530.6 ENSRNOT00000012842.6 ENSRNOP00000012842.4
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFACmiRNAMapRAID2
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/UCH 1.20e-71 242.3 3 230
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/UCH

   S: 5    vkewleLesdPglftllvedfgvkrdiqveelysLdpenlglyqepvegllllFkinekressrksqvtsndlevvdediiktiffakq 93
    +++wl+Le++P++ +++++++g++ ++q+ ++y+++pe l+++++pv+++lllF+i+ek+e +r+++ ++++++++d++++++f+kq
   Q: 3 GQRWLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVFRTEE--EEKIKSQGQDVTSSVYFMKQ 89
    589*************************************************************766..5589**************** PP
   S: 94 vigNsCatyAllsvllncedkl.ldlGttlsrlkestkaespenkalalgnqqvlecihnslariesrseperqdedneqytkeafhfv 181
    +i+N+C+t++l+++++n++dk+ ++ G+ l++++e++ a+spe++a++l+n ++++++h++ a+++++++p+ + +k +hf+
   Q: 90 TISNACGTIGLIHAIANNKDKMhFESGSALKKFLEESVAMSPEERARHLENYDAIRVTHETSAHEGQTEAPSID-------EKVDLHFI 171
    ***********************************************************************888.......8899**** PP
   S: 182 syvningrlyeldglkpfPldlgkkketeelkdklkvvraflerikllesdeirfnllaivad 244
    + v+++g+lyeldg+kpfP+++gk+++++ l+d+++v+++f+er + de+rfn++a++a+
   Q: 172 AVVHVDGHLYELDGRKPFPINHGKTSDETLLEDAIEVCKKFMER----DPDELRFNAIALSAA 230
    ********************************************....***********9875 PP
   

Organism Rattus norvegicus
Protein Sequence
(Fasta)
MEGQRWLPLE ANPEVTNQFL KQLGLHPNWQ FVDVYGMEPE LLSMVPRPVC AVLLLFPITE 60
KYEVFRTEEE EKIKSQGQDV TSSVYFMKQT ISNACGTIGL IHAIANNKDK MHFESGSALK 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Rno-105096|DUB,UCH|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAGCAGCGGC GGTGGTGGTG GTGGTGGTGG TGGCGGCGGC GGCTGCTGTC AGAGCTGGAG 60
CGCGGCCGGC TGAGCAGTCA TGGAGGGTCA GCGCTGGCTG CCGCTGGAGG CCAACCCTGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Rno-105096|DUB,UCH|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway

Interpro

IPR001578--Peptidase_C12_UCH

PROSITE

PS00140--UCH_1

Pfam

PF01088--Peptidase_C12

PRINTS

PR00707--UBCTHYDRLASE

Gene Ontology

GO:0005622--C:intracellular
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000360 Aegilops tauschii 43.64 4.00e-52 197.00
IUUC-Aml-001344 Ailuropoda melanoleuca 97.39 2.00e-134 471.00
IUUC-Atr-002931 Amborella trichopoda 45.21 6.00e-47 180.00
IUUC-Apl-003949 Anas platyrhynchos 85.92 2.00e-103 367.00
IUUC-Aca-004924 Anolis carolinensis 81.82 8.00e-114 402.00
IUUC-Aly-005721 Arabidopsis lyrata 49.34 1.00e-58 219.00
IUUC-Ath-006827 Arabidopsis thaliana 50.00 6.00e-59 220.00
IUUC-Ago-007950 Ashbya gossypii 34.68 1.00e-26 112.00
IUUC-Acl-008305 Aspergillus clavatus 39.56 1.00e-39 156.00
IUUC-Afl-008611 Aspergillus flavus 40.68 2.00e-43 169.00
IUUC-Afu-008945 Aspergillus fumigatus 40.68 5.00e-43 167.00
IUUC-Ani-009339 Aspergillus nidulans 40.85 2.00e-43 168.00
IUUC-Ang-009691 Aspergillus niger 37.87 7.00e-42 163.00
IUUC-Aor-009961 Aspergillus oryzae 40.68 2.00e-43 169.00
IUUC-Ate-010316 Aspergillus terreus 40.85 6.00e-44 170.00
IUUC-Ame-011157 Astyanax mexicanus 72.61 2.00e-100 358.00
IUUC-Bgr-012125 Blumeria graminis 36.71 3.00e-39 154.00
IUUC-Bta-012673 Bos taurus 96.52 1.00e-133 468.00
IUUC-Bci-013734 Botrytis cinerea 37.93 5.00e-42 164.00
IUUC-Bdi-014330 Brachypodium distachyon 45.37 3.00e-55 208.00
IUUC-Bol-015214 Brassica oleracea 51.98 6.00e-62 230.00
IUUC-Bra-017491 Brassica rapa 52.42 1.00e-61 229.00
IUUC-Cel-018302 Caenorhabditis elegans 39.64 3.00e-34 138.00
IUUC-Cfa-020371 Canis familiaris 94.21 1.00e-104 372.00
IUUC-Cpo-022036 Cavia porcellus 95.22 4.00e-130 456.00
IUUC-Cre-022599 Chlamydomonas reinhardtii 42.79 9.00e-37 146.00
IUUC-Csa-023854 Chlorocebus sabaeus 96.52 9.00e-133 465.00
IUUC-Cin-025545 Ciona intestinalis 48.89 5.00e-66 243.00
IUUC-Cgl-026409 Colletotrichum gloeosporioides 34.04 9.00e-32 130.00
IUUC-Cne-026914 Cryptococcus neoformans 34.76 1.00e-29 122.00
IUUC-Cme-027216 Cyanidioschyzon merolae 36.49 2.00e-26 112.00
IUUC-Dre-028356 Danio rerio 75.22 2.00e-103 368.00
IUUC-Dse-031461 Dothistroma septosporum 39.66 7.00e-38 150.00
IUUC-Dme-032146 Drosophila melanogaster 50.22 9.00e-62 229.00
IUUC-Eca-033220 Equus caballus 96.96 1.00e-133 468.00
IUUC-Fca-036421 Felis catus 97.39 2.00e-134 471.00
IUUC-Fal-036773 Ficedula albicollis 85.71 4.00e-105 373.00
IUUC-Fox-037830 Fusarium oxysporum 35.93 2.00e-39 155.00
IUUC-Fso-038259 Fusarium solani 35.90 2.00e-37 151.00
IUUC-Gmo-039468 Gadus morhua 68.70 1.00e-83 302.00
IUUC-Ggr-039832 Gaeumannomyces graminis 36.68 3.00e-36 145.00
IUUC-Gga-041205 Gallus gallus 84.35 2.00e-110 391.00
IUUC-Gac-041629 Gasterosteus aculeatus 68.42 3.00e-87 314.00
IUUC-Gma-043057 Glycine max 48.90 3.00e-52 197.00
IUUC-Ggo-044533 Gorilla gorilla 96.97 4.00e-133 466.00
IUUC-Hsa-046754 Homo sapiens 97.39 2.00e-134 471.00
IUUC-Hvu-047176 Hordeum vulgare 40.17 7.00e-43 166.00
IUUC-Itr-047992 Ictidomys tridecemlineatus 94.94 7.00e-89 318.00
IUUC-Kpa-049123 Komagataella pastoris 37.31 6.00e-33 134.00
IUUC-Lch-049685 Latimeria chalumnae 77.63 4.00e-109 387.00
IUUC-Lpe-051377 Leersia perrieri 44.83 7.00e-46 176.00
IUUC-Loc-051988 Lepisosteus oculatus 76.52 2.00e-105 375.00
IUUC-Lma-053316 Leptosphaeria maculans 39.39 5.00e-41 160.00
IUUC-Laf-053985 Loxodonta africana 96.54 9.00e-133 465.00
IUUC-Mcc-055888 Macaca mulatta 95.22 1.00e-129 454.00
IUUC-Mor-057271 Magnaporthe oryzae 36.24 6.00e-40 157.00
IUUC-Mpo-057343 Magnaporthe poae 32.19 7.00e-22 96.70
IUUC-Mtr-057713 Medicago truncatula 48.23 2.00e-52 199.00
IUUC-Mla-058942 Melampsora laricipopulina 44.93 1.00e-46 179.00
IUUC-Mga-059702 Meleagris gallopavo 85.45 7.00e-103 366.00
IUUC-Mvi-060249 Microbotryum violaceum 44.30 2.00e-41 162.00
IUUC-Mmr-061284 Microcebus murinus 97.47 3.00e-90 324.00
IUUC-Mdo-062639 Monodelphis domestica 79.40 7.00e-122 429.00
IUUC-Mmu-063299 Mus musculus 97.83 1.00e-134 471.00
IUUC-Mac-065075 Musa acuminata 44.98 2.00e-52 199.00
IUUC-Mpu-066769 Mustela putorius furo 97.39 2.00e-134 471.00
IUUC-Mlu-066937 Myotis lucifugus 94.35 9.00e-130 455.00
IUUC-Nfi-068320 Neosartorya fischeri 40.68 1.00e-43 169.00
IUUC-Ncr-068673 Neurospora crassa 37.66 1.00e-43 169.00
IUUC-Nle-069175 Nomascus leucogenys 97.17 8.00e-122 429.00
IUUC-Opr-070652 Ochotona princeps 97.39 2.00e-62 232.00
IUUC-Ont-072170 Oreochromis niloticus 70.61 8.00e-89 319.00
IUUC-Oan-073247 Ornithorhynchus anatinus 92.92 6.00e-59 218.00
IUUC-Ocu-074422 Oryctolagus cuniculus 96.52 3.00e-134 470.00
IUUC-Oba-075098 Oryza barthii 41.59 6.00e-49 186.00
IUUC-Obr-076041 Oryza brachyantha 44.74 1.00e-53 202.00
IUUC-Ogl-076980 Oryza glaberrima 45.18 2.00e-53 201.00
IUUC-Ogu-078978 Oryza glumaepatula 38.34 2.00e-46 178.00
IUUC-Oin-079285 Oryza indica 41.15 4.00e-48 184.00
IUUC-Olo-080671 Oryza longistaminata 41.59 2.00e-48 184.00
IUUC-Ome-081428 Oryza meridionalis 40.71 6.00e-47 180.00
IUUC-Oni-082406 Oryza nivara 41.59 6.00e-49 186.00
IUUC-Opu-083305 Oryza punctata 41.59 5.00e-48 184.00
IUUC-Oru-084969 Oryza rufipogon 41.59 6.00e-49 186.00
IUUC-Osa-085830 Oryza sativa 45.18 2.00e-53 201.00
IUUC-Ola-086893 Oryzias latipes 68.42 2.00e-85 308.00
IUUC-Olu-087858 Ostreococcus lucimarinus 44.05 2.00e-51 195.00
IUUC-Oga-088055 Otolemur garnettii 96.97 4.00e-133 466.00
IUUC-Oar-090319 Ovis aries 96.09 4.00e-133 466.00
IUUC-Pan-092714 Papio anubis 96.10 7.00e-132 462.00
IUUC-Psi-094036 Pelodiscus sinensis 84.33 9.00e-104 369.00
IUUC-Pma-094412 Petromyzon marinus 64.94 4.00e-55 206.00
IUUC-Pno-094997 Phaeosphaeria nodorum 35.83 1.00e-33 136.00
IUUC-Ppa-095519 Physcomitrella patens 50.67 3.00e-63 234.00
IUUC-Pfo-096182 Poecilia formosa 67.83 1.00e-87 315.00
IUUC-Pab-098216 Pongo abelii 96.53 1.00e-80 291.00
IUUC-Pop-099282 Populus trichocarpa 48.67 2.00e-52 198.00
IUUC-Ppe-101332 Prunus persica 47.79 1.00e-54 206.00
IUUC-Pgr-103430 Puccinia graminis 47.48 2.00e-50 191.00
IUUC-Ptt-103955 Puccinia triticina 48.28 3.00e-50 191.00
IUUC-Pte-104414 Pyrenophora teres 38.03 4.00e-38 151.00
IUUC-Pyt-104753 Pyrenophora triticirepentis 34.03 1.00e-33 136.00
IUUC-Sce-106412 Saccharomyces cerevisiae 33.75 1.00e-28 119.00
IUUC-Sha-106677 Sarcophilus harrisii 93.09 1.00e-120 425.00
IUUC-Sja-107753 Schizosaccharomyces japonicus 30.48 2.00e-25 108.00
IUUC-Spo-108322 Schizosaccharomyces pombe 31.00 8.00e-26 110.00
IUUC-Ssl-108641 Sclerotinia sclerotiorum 37.61 2.00e-38 152.00
IUUC-Smo-108914 Selaginella moellendorffii 48.28 6.00e-53 200.00
IUUC-Sit-110163 Setaria italica 46.98 3.00e-54 205.00
IUUC-Sly-111613 Solanum lycopersicum 49.34 2.00e-61 228.00
IUUC-Stu-112526 Solanum tuberosum 50.00 2.00e-56 212.00
IUUC-Sbi-114545 Sorghum bicolor 46.29 3.00e-52 197.00
IUUC-Sre-114961 Sporisorium reilianum 42.49 3.00e-40 158.00
IUUC-Ssc-115255 Sus scrofa 94.81 5.00e-120 422.00
IUUC-Tgu-117003 Taeniopygia guttata 84.78 7.00e-110 389.00
IUUC-Tru-118330 Takifugu rubripes 61.75 1.00e-67 251.00
IUUC-Tsy-119488 Tarsius syrichta 95.61 8.00e-62 229.00
IUUC-Tni-120042 Tetraodon nigroviridis 63.04 2.00e-69 256.00
IUUC-Tca-120976 Theobroma cacao 47.79 1.00e-55 209.00
IUUC-Tre-122149 Trichoderma reesei 39.13 4.00e-43 167.00
IUUC-Tvi-122450 Trichoderma virens 38.70 1.00e-42 166.00
IUUC-Tae-122693 Triticum aestivum 44.78 1.00e-52 199.00
IUUC-Tur-126250 Triticum urartu 43.64 9.00e-52 196.00
IUUC-Tme-126961 Tuber melanosporum 36.60 3.00e-35 142.00
IUUC-Uma-129382 Ustilago maydis 41.81 7.00e-43 166.00
IUUC-Vda-129678 Verticillium dahliae 31.65 5.00e-31 127.00
IUUC-Vpa-130783 Vicugna pacos 96.52 5.00e-62 230.00
IUUC-Vvi-131661 Vitis vinifera 46.72 8.00e-56 209.00
IUUC-Xtr-132428 Xenopus tropicalis 73.91 7.00e-106 375.00
IUUC-Xma-134245 Xiphophorus maculatus 67.11 2.00e-87 315.00
IUUC-Yli-134570 Yarrowia lipolytica 35.47 1.00e-35 142.00
IUUC-Zma-134740 Zea mays 45.41 9.00e-54 202.00
Created Date 25-Jun-2017

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