iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Osa-085424

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OS04G0580800	OS04T0580800-01	OS04T0580800-01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.90e-08	34.6	101	144

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgpl.vlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cle++   ++ ++ +++C H+fh  C+ +w        +e +CPlCr
   Q: 101  CRVCLERLeatDE-VRrLGNCTHAFHIGCIDRW-----IDLGEVTCPLCR 144
           ********88544.661566*************.....577899*****8 PP

Organism

Oryza sativa

Protein Sequence
(Fasta)

MSFPLVCFCR QIPRPIVALF KLLQAVALAF VLILCFLGLY EFPYTVEDHA PLIHGRRRDP 60
LGDDGLQPEA VKRGLPLVEY MQLADLSADC HDGESGYPAT CRVCLERLEA TDEVRRLGNC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCCTCTAAA ACCAGACACT GCTGCTGCGT GTCTGTGTGC CGCGCCACCT ATGCACCTCG 60
CGCGCGCGGC AAGCGCTCCT CCTGCCGGCG CCTTCCCCTG TCCCTCGCTT GCCTCCAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014370	Brachypodium distachyon	59.12	8.00e-39	151.00
IUUC-Hvu-047845	Hordeum vulgare	62.35	2.00e-53	201.00
IUUC-Lpe-050863	Leersia perrieri	78.34	7.00e-63	231.00
IUUC-Oba-075162	Oryza barthii	100.00	1.00e-91	327.00
IUUC-Obr-076437	Oryza brachyantha	86.75	1.00e-64	237.00
IUUC-Ogl-077806	Oryza glaberrima	99.32	3.00e-74	269.00
IUUC-Ogu-078778	Oryza glumaepatula	100.00	1.00e-91	327.00
IUUC-Oin-079413	Oryza indica	100.00	1.00e-91	327.00
IUUC-Ome-081854	Oryza meridionalis	99.38	3.00e-91	325.00
IUUC-Oni-082515	Oryza nivara	100.00	1.00e-91	327.00
IUUC-Opu-083540	Oryza punctata	94.44	3.00e-87	312.00
IUUC-Oru-084686	Oryza rufipogon	99.38	4.00e-91	325.00
IUUC-Pgr-103545	Puccinia graminis	37.21	4.00e-10	57.40
IUUC-Sit-110391	Setaria italica	65.41	2.00e-50	191.00
IUUC-Sbi-114449	Sorghum bicolor	70.06	4.00e-40	155.00
IUUC-Tca-121111	Theobroma cacao	33.76	2.00e-16	77.00
IUUC-Tae-125907	Triticum aestivum	63.53	7.00e-54	201.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence