iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121444

Ensembl Protein ID

EOY15342

UniProt Accession

A0A061FF49; A0A061FF49_THECC

Genbank Protein ID

EOY15342.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001886

Gene Name

TCM_034434

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_034434	EOY15342	EOY15342

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.40e-09	36.9	109	151

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f   d+ +vlp CgH fh  C+ +w         + +CP Cr
   Q: 109  CAICLAEFevGDEIRVLPqCGHGFHVACIDMW------LGSHSSCPSCR 151
           ********99555*******************......99********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MTRPFRLLGA ANSSATSEPP PPPPEQGATV DSDFVVILAA LLCALICVLG LIAVARCAWL 60
RRLSGSSASN PADTPRPTPP ANKGLKKKIL KSLPKATFSA ESSAKFSDCA ICLAEFEVGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACGTTAGAA CAACTGGACA CAACACAACA CAACACTACA GTACAAAAAC GAATCTCTCT 60
CACTCTCTCT CTCTTCACAT GACTCGTCCT TTCAGACTCC TAGGCGCCGC CAACTCCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

tcc:TCM_034434

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002926	Amborella trichopoda	56.80	1.00e-25	108.00
IUUC-Aly-005492	Arabidopsis lyrata	61.26	4.00e-54	203.00
IUUC-Ath-007319	Arabidopsis thaliana	61.42	6.00e-46	176.00
IUUC-Bol-016283	Brassica oleracea	57.58	6.00e-42	162.00
IUUC-Bra-017495	Brassica rapa	62.79	2.00e-44	170.00
IUUC-Gma-042991	Glycine max	62.24	6.00e-44	169.00
IUUC-Lpe-050856	Leersia perrieri	47.31	8.00e-28	115.00
IUUC-Mtr-057866	Medicago truncatula	78.31	3.00e-36	143.00
IUUC-Oba-075661	Oryza barthii	51.52	3.00e-26	110.00
IUUC-Obr-076446	Oryza brachyantha	53.73	2.00e-31	127.00
IUUC-Oin-079945	Oryza indica	50.35	3.00e-31	126.00
IUUC-Opu-083570	Oryza punctata	43.88	1.00e-25	108.00
IUUC-Oru-084952	Oryza rufipogon	51.91	5.00e-31	126.00
IUUC-Osa-085373	Oryza sativa	50.68	4.00e-28	116.00
IUUC-Pop-098856	Populus trichocarpa	67.00	3.00e-52	196.00
IUUC-Ppe-101319	Prunus persica	58.64	1.00e-51	195.00
IUUC-Sly-111851	Solanum lycopersicum	79.41	3.00e-47	180.00
IUUC-Stu-112165	Solanum tuberosum	70.73	4.00e-48	182.00
IUUC-Tae-122956	Triticum aestivum	49.46	5.00e-21	93.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence