iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099631

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000345

Gene Name

POPTRDRAFT_556865; POPTR_0009s15960g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s15960	POPTR_0009s15960.1	POPTR_0009s15960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-31	107.5	254	287

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrtgvl 35
           H++++t+la+ d t++ sGs+D t+++WD ++  +
   Q: 254  HEGPITSLAL-DpTRIYSGSWDMTVRIWDRSSLEC 287
           9*********.55****************766666 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAFECQKSTE VSKSLAICVE KSNSNTEHLE ISKSPLDCYP KKGILSSLSS KQLSCNDVLL 60
NCRRSITDLP PALISEILSC LDPQELGIVS CVSRVLNSLA TENSVWKEVY GERWGLPIVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAAAAAC CTCAAAACAG CTCACTCTTT TCCTCTTGTA GATTATGATC TGATCATATT 60
TGACAAGAAA TTCTCTAACC CAACAAAACT ATTTACAGTA TCTGCTTCAA AGATCTTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12937--F-box-like
PF00400--WD40

SMART

SM00256--FBOX
SM00320--WD40

Gene Ontology

GO:0016036--P:cellular response to phosphate starvation

KEGG

pop:POPTR_0009s15960g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000413	Aegilops tauschii	58.63	3.00e-167	582.00
IUUC-Atr-002870	Amborella trichopoda	52.67	4.00e-136	477.00
IUUC-Aly-005424	Arabidopsis lyrata	64.60	0.00e+00	661.00
IUUC-Ath-007005	Arabidopsis thaliana	63.50	0.00e+00	664.00
IUUC-Bdi-014622	Brachypodium distachyon	59.12	4.00e-170	590.00
IUUC-Bol-016449	Brassica oleracea	63.39	0.00e+00	662.00
IUUC-Bra-017684	Brassica rapa	68.99	1.00e-138	484.00
IUUC-Gma-044132	Glycine max	64.87	0.00e+00	689.00
IUUC-Hvu-047789	Hordeum vulgare	59.25	4.00e-171	593.00
IUUC-Lpe-051245	Leersia perrieri	54.12	1.00e-157	549.00
IUUC-Mtr-058000	Medicago truncatula	68.22	0.00e+00	665.00
IUUC-Mac-065354	Musa acuminata	62.99	4.00e-173	600.00
IUUC-Oba-074979	Oryza barthii	55.38	4.00e-163	567.00
IUUC-Obr-076615	Oryza brachyantha	58.64	9.00e-168	582.00
IUUC-Ogl-077075	Oryza glaberrima	55.38	2.00e-163	568.00
IUUC-Ogu-078476	Oryza glumaepatula	55.38	1.00e-163	568.00
IUUC-Oin-079267	Oryza indica	55.58	6.00e-164	570.00
IUUC-Olo-080272	Oryza longistaminata	55.58	7.00e-164	570.00
IUUC-Ome-081994	Oryza meridionalis	55.58	2.00e-164	572.00
IUUC-Oni-082607	Oryza nivara	55.58	6.00e-164	570.00
IUUC-Opu-083533	Oryza punctata	56.58	1.00e-166	579.00
IUUC-Oru-084485	Oryza rufipogon	55.58	8.00e-164	570.00
IUUC-Osa-085675	Oryza sativa	55.58	7.00e-164	570.00
IUUC-Ppa-095179	Physcomitrella patens	44.11	1.00e-102	366.00
IUUC-Ppe-102090	Prunus persica	67.08	0.00e+00	736.00
IUUC-Smo-108901	Selaginella moellendorffii	44.39	2.00e-97	348.00
IUUC-Sit-110702	Setaria italica	53.50	3.00e-162	564.00
IUUC-Sly-110878	Solanum lycopersicum	63.81	0.00e+00	672.00
IUUC-Stu-112399	Solanum tuberosum	63.77	0.00e+00	660.00
IUUC-Sbi-114384	Sorghum bicolor	57.70	2.00e-158	551.00
IUUC-Tca-121388	Theobroma cacao	75.82	0.00e+00	794.00
IUUC-Tae-125186	Triticum aestivum	58.63	2.00e-167	581.00
IUUC-Tur-126520	Triticum urartu	58.33	5.00e-166	577.00
IUUC-Vvi-131268	Vitis vinifera	75.20	0.00e+00	708.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence