iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095442

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545127

Gene Name

PHYPADRAFT_170260

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S65_161V6	PP1S65_161V6.1	PP1S65_161V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	5.70e-57	192.1	5	139
UBD/UBC-like/UBD_UBC	2.30e-75	252.0	5	142

Active Site

Position(s)	Description	Evidence
93	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWspa 95
           R+ kelk+l+kdpp+++sa+pv e d+++w+++i+Gp+d+pY+ggvF ++i+fp+dYPfkPPkv f tk+fhPn+++nG++Cl+ilk  e+Wspa
   Q: 5    RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK--EQWSPA 96
           899*********************.9************************************************************9..****** PP
   S: 96   lsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           l++++vllsi+sll++pnp++pl  e+a+++k++r++y++++r
   Q: 97   LTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRQKYESTAR 139
           ***************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqwsaaltl 95
           ri kelkdl++d+++ +sa++v +d+f+++ati+gppdspy ggvf +ti++p dypfkppkvaf tk++hpninsngsicldil++qws+alt+
   Q: 5    RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTI 99
           899******************************************************************************************** PP
   S: 96   skvllslcslladaepddplvaeiariyktdkekykriarewt 138
           skvlls+csll+d++pddplv+eia++yktd++ky+ +ar wt
   Q: 100  SKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRQKYESTARSWT 142
           ******************************************8 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP PDSPYAGGVF LVTIHFPPDY 60
PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCTGTTTTG GCCATCATCT TCGCCATTTG CTTCGTCGTC TCTCCGTCGC AACCCCAGTC 60
CGGCGTTGCT GCCCTGGTTC CCTGCCTGCC TGCCCTCTTC GCCTATACGT TCACTGCACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0006301--P:postreplication repair
GO:0070534--P:protein K63-linked ubiquitination

KEGG

ppp:PHYPADRAFT_170260

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006364	Arabidopsis lyrata	97.30	3.00e-84	302.00
IUUC-Bgr-012238	Blumeria graminis	78.91	9.00e-70	254.00
IUUC-Bdi-014712	Brachypodium distachyon	95.95	2.00e-83	300.00
IUUC-Bol-016243	Brassica oleracea	97.97	2.00e-84	303.00
IUUC-Cpo-021714	Cavia porcellus	79.59	5.00e-69	252.00
IUUC-Cre-022765	Chlamydomonas reinhardtii	85.14	3.00e-75	273.00
IUUC-Dre-028686	Danio rerio	81.63	2.00e-71	260.00
IUUC-Dor-030323	Dipodomys ordii	80.27	1.00e-70	257.00
IUUC-Ggr-039912	Gaeumannomyces graminis	75.66	5.00e-67	245.00
IUUC-Gma-043923	Glycine max	99.32	2.00e-85	306.00
IUUC-Hvu-047546	Hordeum vulgare	93.92	1.00e-81	294.00
IUUC-Lma-053121	Leptosphaeria maculans	79.59	3.00e-71	259.00
IUUC-Mor-057235	Magnaporthe oryzae	80.95	3.00e-71	259.00
IUUC-Oba-075251	Oryza barthii	95.95	5.00e-83	298.00
IUUC-Ogu-078338	Oryza glumaepatula	95.95	5.00e-83	298.00
IUUC-Olo-080786	Oryza longistaminata	95.27	8.00e-83	298.00
IUUC-Ome-081987	Oryza meridionalis	95.95	5.00e-83	298.00
IUUC-Oni-082631	Oryza nivara	95.95	5.00e-83	298.00
IUUC-Oru-085020	Oryza rufipogon	95.95	5.00e-83	298.00
IUUC-Osa-086291	Oryza sativa	96.62	2.00e-83	300.00
IUUC-Pno-094765	Phaeosphaeria nodorum	79.59	3.00e-71	259.00
IUUC-Pte-104015	Pyrenophora teres	79.59	4.00e-71	259.00
IUUC-Pyt-104701	Pyrenophora triticirepentis	79.59	4.00e-71	259.00
IUUC-Sja-107729	Schizosaccharomyces japonicus	80.27	6.00e-71	258.00
IUUC-Smo-108911	Selaginella moellendorffii	98.65	9.00e-85	304.00
IUUC-Sit-109936	Setaria italica	94.59	7.00e-83	299.00
IUUC-Sly-111055	Solanum lycopersicum	98.65	6.00e-85	305.00
IUUC-Sbi-114213	Sorghum bicolor	95.95	3.00e-83	299.00
IUUC-Sre-115037	Sporisorium reilianum	79.17	1.00e-68	250.00
IUUC-Tae-123745	Triticum aestivum	95.27	3.00e-83	299.00
IUUC-Tur-126518	Triticum urartu	95.27	7.00e-84	302.00
IUUC-Uma-129648	Ustilago maydis	80.27	5.00e-71	258.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence