iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mvi-060520

Ensembl Protein ID

MVLG_05705T0

UniProt Accession

U5HF18; U5HF18_USTV1

Genbank Protein ID

KDE03821.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F

Genbank Nucleotide ID

AEIJ01000607

Gene Name

MVLG_05705

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MVLG_05705	MVLG_05705T0	MVLG_05705T0

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	27.95	1.00e-20	98.60	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Microbotryum violaceum

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MSLSLALPST SLASTRPVSK VVVSPLPLAA MLDHHLRRSS SQDRVLGTLL GIRHEASNEI 60
EVRTSFGVPY QAQGKGSITI DMDHHKALLD LHHKVNPREV VVGWYATHPT LNSFSALIHN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCAGCAAAG CTCTTTCACC AGCTTTCACT CGGTCACGCC CTCGCGACGA TCCCCTTACG 60
CCCTCTTACG GCTTGGCTTG CCTTGGCTGC TCTGTCCTCG CCTCTTCACT CACCTCACCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	25.99	3.00e-17	80.90
IUUC-Aml-001527	Ailuropoda melanoleuca	29.24	3.00e-31	127.00
IUUC-Atr-002686	Amborella trichopoda	33.94	5.00e-23	99.40
IUUC-Apl-003977	Anas platyrhynchos	26.34	9.00e-24	101.00
IUUC-Aca-004335	Anolis carolinensis	28.20	3.00e-30	124.00
IUUC-Aly-005945	Arabidopsis lyrata	28.98	3.00e-24	103.00
IUUC-Ath-007045	Arabidopsis thaliana	29.51	1.00e-23	101.00
IUUC-Acl-008365	Aspergillus clavatus	36.99	2.00e-47	181.00
IUUC-Afl-008742	Aspergillus flavus	35.82	4.00e-45	173.00
IUUC-Afu-009030	Aspergillus fumigatus	36.68	5.00e-47	179.00
IUUC-Ani-009212	Aspergillus nidulans	36.76	9.00e-48	182.00
IUUC-Ang-009712	Aspergillus niger	36.89	2.00e-47	181.00
IUUC-Aor-009885	Aspergillus oryzae	37.27	2.00e-47	181.00
IUUC-Ate-010315	Aspergillus terreus	35.11	1.00e-44	171.00
IUUC-Ame-010801	Astyanax mexicanus	37.86	3.00e-14	70.50
IUUC-Bgr-011982	Blumeria graminis	32.01	3.00e-39	153.00
IUUC-Bta-012804	Bos taurus	29.06	3.00e-31	127.00
IUUC-Bci-013891	Botrytis cinerea	33.75	4.00e-38	150.00
IUUC-Bdi-014328	Brachypodium distachyon	26.51	8.00e-19	85.50
IUUC-Bol-015446	Brassica oleracea	29.43	3.00e-27	113.00
IUUC-Bra-016862	Brassica rapa	29.17	3.00e-27	113.00
IUUC-Cel-018171	Caenorhabditis elegans	23.38	4.00e-14	70.10
IUUC-Cja-019335	Callithrix jacchus	29.35	2.00e-31	127.00
IUUC-Cfa-020138	Canis familiaris	29.24	2.00e-31	127.00
IUUC-Cpo-022109	Cavia porcellus	28.57	6.00e-25	106.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	28.12	1.00e-28	118.00
IUUC-Csa-023994	Chlorocebus sabaeus	29.35	2.00e-31	127.00
IUUC-Cho-024351	Choloepus hoffmanni	30.51	6.00e-18	83.20
IUUC-Cin-025801	Ciona intestinalis	27.90	1.00e-31	128.00
IUUC-Csv-025805	Ciona savignyi	28.48	4.00e-30	123.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	29.77	2.00e-34	137.00
IUUC-Cne-026868	Cryptococcus neoformans	29.21	4.00e-35	139.00
IUUC-Dre-028085	Danio rerio	30.91	2.00e-32	130.00
IUUC-Dno-030099	Dasypus novemcinctus	29.24	4.00e-31	127.00
IUUC-Dor-030324	Dipodomys ordii	26.91	1.00e-25	108.00
IUUC-Dse-031314	Dothistroma septosporum	33.33	9.00e-46	175.00
IUUC-Dme-031926	Drosophila melanogaster	27.48	1.00e-23	101.00
IUUC-Ete-032569	Echinops telfairi	27.42	2.00e-26	110.00
IUUC-Eca-033502	Equus caballus	27.81	3.00e-27	114.00
IUUC-Eeu-034883	Erinaceus europaeus	27.66	2.00e-05	40.40
IUUC-Fca-035873	Felis catus	29.24	3.00e-31	127.00
IUUC-Fal-036921	Ficedula albicollis	28.15	3.00e-30	123.00
IUUC-Fox-037765	Fusarium oxysporum	29.49	2.00e-30	124.00
IUUC-Fso-038240	Fusarium solani	29.17	1.00e-30	125.00
IUUC-Gmo-038864	Gadus morhua	28.90	5.00e-31	126.00
IUUC-Ggr-039862	Gaeumannomyces graminis	40.00	1.00e-23	102.00
IUUC-Gga-040952	Gallus gallus	28.30	1.00e-30	125.00
IUUC-Gac-041677	Gasterosteus aculeatus	28.21	9.00e-32	128.00
IUUC-Gma-043061	Glycine max	34.34	5.00e-22	96.30
IUUC-Ggo-045591	Gorilla gorilla	29.35	2.00e-31	128.00
IUUC-Hsa-046860	Homo sapiens	29.35	2.00e-31	127.00
IUUC-Hvu-047410	Hordeum vulgare	20.43	1.00e-06	43.90
IUUC-Itr-048211	Ictidomys tridecemlineatus	29.24	3.00e-31	127.00
IUUC-Lch-049410	Latimeria chalumnae	35.33	2.00e-19	87.00
IUUC-Lpe-051102	Leersia perrieri	25.25	1.00e-20	91.70
IUUC-Loc-052016	Lepisosteus oculatus	26.65	6.00e-18	82.80
IUUC-Lma-053157	Leptosphaeria maculans	34.78	7.00e-47	179.00
IUUC-Laf-054568	Loxodonta africana	29.35	3.00e-31	127.00
IUUC-Mcc-054613	Macaca mulatta	29.35	2.00e-31	128.00
IUUC-Meu-056832	Macropus eugenii	20.90	3.00e-07	47.00
IUUC-Mor-057104	Magnaporthe oryzae	31.43	1.00e-31	128.00
IUUC-Mtr-058445	Medicago truncatula	27.12	6.00e-26	109.00
IUUC-Mla-059038	Melampsora laricipopulina	46.35	3.00e-72	263.00
IUUC-Mga-059548	Meleagris gallopavo	26.59	1.00e-24	104.00
IUUC-Mdo-062376	Monodelphis domestica	29.14	9.00e-30	122.00
IUUC-Mmu-063254	Mus musculus	29.24	5.00e-31	126.00
IUUC-Mac-065635	Musa acuminata	26.17	8.00e-23	99.00
IUUC-Mpu-066314	Mustela putorius furo	29.24	3.00e-31	127.00
IUUC-Mlu-067512	Myotis lucifugus	28.24	3.00e-30	124.00
IUUC-Nfi-068262	Neosartorya fischeri	36.68	6.00e-47	179.00
IUUC-Ncr-068872	Neurospora crassa	30.45	1.00e-32	132.00
IUUC-Nle-070118	Nomascus leucogenys	29.24	3.00e-31	127.00
IUUC-Opr-071228	Ochotona princeps	27.82	2.00e-25	107.00
IUUC-Ont-072600	Oreochromis niloticus	30.13	2.00e-32	130.00
IUUC-Oan-073584	Ornithorhynchus anatinus	27.44	7.00e-25	105.00
IUUC-Ocu-074542	Oryctolagus cuniculus	29.24	2.00e-31	128.00
IUUC-Oba-075923	Oryza barthii	26.28	6.00e-22	96.30
IUUC-Obr-076313	Oryza brachyantha	25.25	4.00e-21	93.20
IUUC-Ogl-076932	Oryza glaberrima	26.28	6.00e-22	96.30
IUUC-Ogu-078152	Oryza glumaepatula	26.28	6.00e-22	96.30
IUUC-Oin-079528	Oryza indica	26.28	6.00e-22	96.30
IUUC-Olo-080401	Oryza longistaminata	26.28	6.00e-22	96.30
IUUC-Ome-081553	Oryza meridionalis	25.98	1.00e-21	94.70
IUUC-Oni-082090	Oryza nivara	26.01	7.00e-22	95.90
IUUC-Opu-083583	Oryza punctata	24.92	1.00e-19	88.60
IUUC-Oru-084492	Oryza rufipogon	26.28	6.00e-22	96.30
IUUC-Osa-085383	Oryza sativa	26.28	6.00e-22	96.30
IUUC-Ola-086835	Oryzias latipes	28.21	5.00e-30	122.00
IUUC-Olu-087716	Ostreococcus lucimarinus	24.34	1.00e-19	88.20
IUUC-Oga-088886	Otolemur garnettii	29.51	2.00e-31	127.00
IUUC-Oar-090079	Ovis aries	28.97	2.00e-31	127.00
IUUC-Ptr-091457	Pan troglodytes	29.35	2.00e-31	127.00
IUUC-Pan-092317	Papio anubis	26.24	5.00e-14	69.30
IUUC-Psi-093129	Pelodiscus sinensis	26.59	3.00e-25	107.00
IUUC-Pma-094488	Petromyzon marinus	28.04	3.00e-31	126.00
IUUC-Pno-095049	Phaeosphaeria nodorum	34.78	1.00e-46	178.00
IUUC-Ppa-095341	Physcomitrella patens	30.69	2.00e-34	137.00
IUUC-Pfo-096286	Poecilia formosa	29.01	2.00e-32	130.00
IUUC-Pab-097765	Pongo abelii	29.35	2.00e-31	127.00
IUUC-Pop-099131	Populus trichocarpa	26.97	2.00e-22	97.80
IUUC-Pca-100524	Procavia capensis	24.89	1.00e-09	55.10
IUUC-Ppe-101934	Prunus persica	27.18	3.00e-27	113.00
IUUC-Pva-102577	Pteropus vampyrus	29.24	3.00e-31	127.00
IUUC-Pgr-103521	Puccinia graminis	47.15	1.00e-75	274.00
IUUC-Pte-104304	Pyrenophora teres	35.40	8.00e-48	182.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	35.40	5.00e-48	182.00
IUUC-Rno-105717	Rattus norvegicus	29.24	4.00e-31	127.00
IUUC-Sha-107190	Sarcophilus harrisii	29.10	2.00e-29	121.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	34.04	4.00e-44	169.00
IUUC-Spo-108355	Schizosaccharomyces pombe	37.50	2.00e-48	183.00
IUUC-Smo-109374	Selaginella moellendorffii	28.71	1.00e-34	137.00
IUUC-Sit-110119	Setaria italica	25.88	5.00e-22	96.30
IUUC-Sly-111570	Solanum lycopersicum	28.86	7.00e-20	89.40
IUUC-Stu-112308	Solanum tuberosum	27.98	2.00e-22	97.80
IUUC-Sar-113515	Sorex araneus	31.82	2.00e-06	43.50
IUUC-Sbi-114605	Sorghum bicolor	26.00	1.00e-21	95.90
IUUC-Sre-114906	Sporisorium reilianum	38.70	1.00e-54	205.00
IUUC-Tgu-117087	Taeniopygia guttata	26.10	1.00e-24	104.00
IUUC-Tru-117700	Takifugu rubripes	29.28	3.00e-32	130.00
IUUC-Tni-120470	Tetraodon nigroviridis	30.77	1.00e-32	131.00
IUUC-Tca-121109	Theobroma cacao	35.12	4.00e-21	93.20
IUUC-Tre-122095	Trichoderma reesei	29.71	2.00e-31	128.00
IUUC-Tvi-122580	Trichoderma virens	29.71	5.00e-31	126.00
IUUC-Tae-125129	Triticum aestivum	26.56	1.00e-19	88.20
IUUC-Tur-126658	Triticum urartu	22.08	1.00e-12	65.50
IUUC-Tme-127043	Tuber melanosporum	36.91	4.00e-52	196.00
IUUC-Tbe-127927	Tupaia belangeri	29.24	3.00e-31	127.00
IUUC-Ttr-129231	Tursiops truncatus	29.24	3.00e-31	127.00
IUUC-Uma-129578	Ustilago maydis	38.08	1.00e-53	201.00
IUUC-Vda-129730	Verticillium dahliae	29.39	3.00e-32	130.00
IUUC-Vvi-130968	Vitis vinifera	30.77	3.00e-26	110.00
IUUC-Xtr-132203	Xenopus tropicalis	29.13	4.00e-31	126.00
IUUC-Xma-133972	Xiphophorus maculatus	29.81	4.00e-33	133.00
IUUC-Yli-134553	Yarrowia lipolytica	33.33	1.00e-38	151.00
IUUC-Zma-134941	Zea mays	25.24	3.00e-17	80.50

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence