iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016864

Ensembl Protein ID

Bra027436.1-P

UniProt Accession

M4EF74; M4EF74_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra027436	Bra027436.1	Bra027436.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-06	29.2	226	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl+df+ g   + +pC+H fh +Cl  w         + +CP+Cr
   Q: 226  CTVCLDDFEIGveAKEMPCKHKFHSECLLPW------LELHSSCPVCR 267
           9*******6552244599*************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEDANAIRYW CHMCSRSVNP VIEGDVINCN FCQSGFVEEM DETPEQATND HPHQASESLW 60
APILLGMMND HDQNQRDSES NVENEDDDDD DDDGQINDGE FDLERHLEEI MRRRRRHSAA 120

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Nucleotide Sequence
(Fasta)

ATGGAGGATG CAAACGCGAT TAGGTATTGG TGTCACATGT GCTCTCGATC CGTGAATCCA 60
GTCATCGAAG GCGACGTAAT CAACTGCAAC TTCTGCCAAA GCGGATTCGT CGAAGAAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003093	Amborella trichopoda	48.44	2.00e-53	202.00
IUUC-Aly-005488	Arabidopsis lyrata	64.19	5.00e-100	356.00
IUUC-Ath-007168	Arabidopsis thaliana	67.12	1.00e-100	359.00
IUUC-Bol-015860	Brassica oleracea	88.33	2.00e-135	475.00
IUUC-Oba-075341	Oryza barthii	42.05	1.00e-43	169.00
IUUC-Ogu-078853	Oryza glumaepatula	42.05	1.00e-43	169.00
IUUC-Oin-079077	Oryza indica	41.70	2.00e-43	169.00
IUUC-Olo-080725	Oryza longistaminata	42.40	1.00e-43	170.00
IUUC-Ome-081225	Oryza meridionalis	42.40	1.00e-43	170.00
IUUC-Oni-082373	Oryza nivara	41.70	2.00e-43	169.00
IUUC-Opu-084151	Oryza punctata	43.11	2.00e-45	176.00
IUUC-Oru-084183	Oryza rufipogon	42.05	2.00e-43	169.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence