iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121112

Ensembl Protein ID

EOY31655

UniProt Accession

A0A061GPC3; A0A061GPC3_THECC

Genbank Protein ID

EOY31654.1; EOY31655.1; EOY31656.1; EOY31657.1

Protein Name

RING/U-box superfamily protein isoform 1

Genbank Nucleotide ID

CM001887; CM001887; CM001887; CM001887

Gene Name

TCM_038630

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_038630	EOY31655	EOY31655

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.20e-07	30.8	240	281

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+df+ g   + +pC+H fh  C+  w         + +CP+Cr
   Q: 240  CSVCLDDFEAGseAREMPCKHKFHSGCILPW------LELHSSCPVCR 281
           ********55444889***************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MEEAMAARYW CHQCSRIVNP IMEVEIKCPV CETGFIEEMS SGTRDSEDID SDIGSDRALS 60
LWAPILLGMM GNPRRRRRHR RIDFEEEDDD NDDGEARHGG DTDLDRELES IIRRRRRSSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGAAG CAATGGCAGC AAGGTACTGG TGTCACCAAT GCTCTCGAAT AGTGAATCCC 60
ATCATGGAGG TTGAGATTAA ATGCCCAGTA TGTGAAACTG GGTTCATTGA AGAAATGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000247	Aegilops tauschii	39.60	5.00e-50	191.00
IUUC-Atr-003093	Amborella trichopoda	52.19	3.00e-76	277.00
IUUC-Aly-006367	Arabidopsis lyrata	58.78	2.00e-103	367.00
IUUC-Ath-006738	Arabidopsis thaliana	57.85	2.00e-94	338.00
IUUC-Bol-016131	Brassica oleracea	59.54	4.00e-86	310.00
IUUC-Bra-016653	Brassica rapa	54.83	8.00e-84	303.00
IUUC-Gma-044146	Glycine max	66.57	1.00e-101	362.00
IUUC-Hvu-047180	Hordeum vulgare	58.88	7.00e-38	150.00
IUUC-Lpe-051411	Leersia perrieri	65.15	3.00e-48	184.00
IUUC-Mtr-058295	Medicago truncatula	64.53	9.00e-107	379.00
IUUC-Oba-075341	Oryza barthii	42.20	1.00e-52	199.00
IUUC-Obr-076788	Oryza brachyantha	44.64	7.00e-51	193.00
IUUC-Ogl-077359	Oryza glaberrima	64.62	3.00e-47	181.00
IUUC-Ogu-078853	Oryza glumaepatula	42.20	1.00e-52	199.00
IUUC-Oin-079077	Oryza indica	42.49	7.00e-53	199.00
IUUC-Olo-080725	Oryza longistaminata	42.65	7.00e-53	199.00
IUUC-Ome-081225	Oryza meridionalis	42.65	7.00e-53	199.00
IUUC-Oni-082373	Oryza nivara	42.49	7.00e-53	199.00
IUUC-Opu-084151	Oryza punctata	44.92	3.00e-52	197.00
IUUC-Oru-084183	Oryza rufipogon	42.15	2.00e-52	198.00
IUUC-Osa-085592	Oryza sativa	42.20	1.00e-52	199.00
IUUC-Pop-098858	Populus trichocarpa	75.88	3.00e-110	390.00
IUUC-Ppe-101941	Prunus persica	78.49	6.00e-108	383.00
IUUC-Sly-110912	Solanum lycopersicum	65.22	1.00e-64	239.00
IUUC-Stu-112771	Solanum tuberosum	60.59	2.00e-90	324.00
IUUC-Sbi-114729	Sorghum bicolor	63.16	6.00e-49	187.00
IUUC-Tae-122764	Triticum aestivum	58.88	1.00e-37	149.00
IUUC-Tur-126272	Triticum urartu	61.65	1.00e-48	186.00
IUUC-Vvi-131512	Vitis vinifera	79.79	1.00e-100	359.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence