iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-039840

Ensembl Protein ID

GGTG_02631T0

UniProt Accession

J3NMX3; J3NMX3_GAGT3

Genbank Protein ID

EJT77524.1

Protein Name

Periodic tryptophan protein 2

Genbank Nucleotide ID

ADBI01000253

Gene Name

GGTG_02631

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_02631	GGTG_02631T0	GGTG_02631T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-34	115.0	469	499
UBD/Beta-Prp	5.60e-68	228.8	258	450

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+++v++laf +d +llvsGs+D+t +vW+
   Q: 469  GHEGPVSALAFaPDgGLLVSGSWDKTARVWN 499
           8***********999***************9 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseD.rtikvwdlstgkcvhtlkghedsvlslsfsps 105
            + ++c +++p+++ll++g+ +g   ++++ + +l+++ls  ++++  v+++++g++l+ g++  + + vw+ ++ +++ + +gh ds  +l++sp+
   Q: 258  NASLKCAAYHPESNLLVAGFSNGLFGLYEMPDFNLIHTLSISQNAIDFVTINKSGEWLAFGASKlGQLLVWEWQSESYILKQQGHFDSMNALAYSPD 354
           56799*******************************************************999999******************************* PP
   S: 106  gdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldg 202
           g+++v++ +d  ++vwd+e+g c+  t+++h++ v+  ++ ++gn+l+++slD+ +r Wdl + +  rt+t     s  ++++d++g+ +++gs d+
   Q: 355  GQRIVTAADDGKLKVWDIESGFCIV-TFTEHTSGVTACQFAKKGNVLFTASLDGSIRAWDLIRYRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSIDS 450
           *************************.********************************************999999************999999885 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MMKTDFKFSN LLGTVYCRGN LLFSPDGTHL FSPVGNRVTV FNLVDNKSYT LPFSHRKNIT 60
RIGLTPRGNL LLSVDEDGHA ILTNVHRRIA VYHFSFRAPL TALAFSPSGH HFAVGLGRKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGCTGCAA CTTTTGCTAC AGACAAAAAA ATATTGCGCA ATGAGGTGAT GATGAAGACG 60
GATTTCAAGG TATGCAGCGC ACACTTCTGT CTTCCTCGAC TCGGTCGGCG CATTTGAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000920--P:cell separation after cytokinesis
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0030010--P:establishment of cell polarity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	43.75	0.00e+00	747.00
IUUC-Atr-003033	Amborella trichopoda	37.92	1.00e-176	612.00
IUUC-Apl-003219	Anas platyrhynchos	43.19	0.00e+00	734.00
IUUC-Aca-004950	Anolis carolinensis	44.47	0.00e+00	765.00
IUUC-Aly-006213	Arabidopsis lyrata	39.54	0.00e+00	645.00
IUUC-Ath-006593	Arabidopsis thaliana	39.21	0.00e+00	643.00
IUUC-Ago-007916	Ashbya gossypii	54.38	0.00e+00	947.00
IUUC-Acl-008225	Aspergillus clavatus	66.17	0.00e+00	1188.00
IUUC-Afl-008390	Aspergillus flavus	62.95	0.00e+00	1182.00
IUUC-Afu-009039	Aspergillus fumigatus	63.79	0.00e+00	1187.00
IUUC-Ani-009228	Aspergillus nidulans	60.33	0.00e+00	1074.00
IUUC-Ang-009663	Aspergillus niger	63.88	0.00e+00	1165.00
IUUC-Aor-009923	Aspergillus oryzae	62.95	0.00e+00	1182.00
IUUC-Ate-010264	Aspergillus terreus	66.44	0.00e+00	1190.00
IUUC-Ame-010790	Astyanax mexicanus	39.34	1.00e-80	291.00
IUUC-Bgr-012066	Blumeria graminis	70.60	0.00e+00	1293.00
IUUC-Bta-012399	Bos taurus	43.42	0.00e+00	717.00
IUUC-Bci-013757	Botrytis cinerea	73.78	0.00e+00	1296.00
IUUC-Bdi-015028	Brachypodium distachyon	41.62	0.00e+00	659.00
IUUC-Bol-016521	Brassica oleracea	39.93	0.00e+00	642.00
IUUC-Bra-017096	Brassica rapa	40.22	0.00e+00	647.00
IUUC-Cel-018690	Caenorhabditis elegans	34.09	1.00e-145	509.00
IUUC-Cja-019229	Callithrix jacchus	43.13	0.00e+00	736.00
IUUC-Cfa-020504	Canis familiaris	43.74	0.00e+00	748.00
IUUC-Cpo-021574	Cavia porcellus	44.05	0.00e+00	761.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	41.90	8.00e-145	506.00
IUUC-Csa-023436	Chlorocebus sabaeus	43.03	0.00e+00	728.00
IUUC-Cin-025397	Ciona intestinalis	40.93	1.00e-161	561.00
IUUC-Csv-026194	Ciona savignyi	48.36	8.00e-142	496.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	78.76	0.00e+00	1422.00
IUUC-Cne-027031	Cryptococcus neoformans	48.56	0.00e+00	898.00
IUUC-Cme-027276	Cyanidioschyzon merolae	30.94	6.00e-71	261.00
IUUC-Dre-027514	Danio rerio	42.54	0.00e+00	707.00
IUUC-Dno-029191	Dasypus novemcinctus	43.67	0.00e+00	636.00
IUUC-Dor-030149	Dipodomys ordii	43.81	0.00e+00	750.00
IUUC-Dse-031260	Dothistroma septosporum	66.38	0.00e+00	793.00
IUUC-Dme-032043	Drosophila melanogaster	38.08	0.00e+00	650.00
IUUC-Ete-033102	Echinops telfairi	52.83	4.00e-157	546.00
IUUC-Eca-033223	Equus caballus	43.68	0.00e+00	750.00
IUUC-Fca-035795	Felis catus	41.65	0.00e+00	688.00
IUUC-Fal-036830	Ficedula albicollis	42.37	0.00e+00	724.00
IUUC-Fox-037835	Fusarium oxysporum	78.59	0.00e+00	1441.00
IUUC-Fso-038324	Fusarium solani	81.26	0.00e+00	1444.00
IUUC-Gmo-039355	Gadus morhua	42.65	0.00e+00	726.00
IUUC-Gga-040907	Gallus gallus	48.43	3.00e-153	533.00
IUUC-Gac-042624	Gasterosteus aculeatus	42.94	0.00e+00	714.00
IUUC-Gma-043034	Glycine max	40.09	0.00e+00	668.00
IUUC-Hsa-046145	Homo sapiens	43.77	0.00e+00	754.00
IUUC-Hvu-047416	Hordeum vulgare	41.40	0.00e+00	668.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	43.74	0.00e+00	753.00
IUUC-Kpa-049150	Komagataella pastoris	52.02	0.00e+00	933.00
IUUC-Lch-049460	Latimeria chalumnae	42.94	1.00e-178	619.00
IUUC-Lpe-050840	Leersia perrieri	40.38	0.00e+00	652.00
IUUC-Loc-052733	Lepisosteus oculatus	42.75	0.00e+00	737.00
IUUC-Lma-053277	Leptosphaeria maculans	68.81	0.00e+00	1222.00
IUUC-Laf-054294	Loxodonta africana	44.16	0.00e+00	730.00
IUUC-Mcc-054624	Macaca mulatta	43.55	0.00e+00	751.00
IUUC-Meu-056665	Macropus eugenii	43.86	5.00e-94	337.00
IUUC-Mor-057288	Magnaporthe oryzae	85.41	0.00e+00	1532.00
IUUC-Mpo-057594	Magnaporthe poae	95.34	0.00e+00	1676.00
IUUC-Mtr-058700	Medicago truncatula	41.36	0.00e+00	691.00
IUUC-Mla-058846	Melampsora laricipopulina	49.04	0.00e+00	838.00
IUUC-Mga-059207	Meleagris gallopavo	38.58	0.00e+00	633.00
IUUC-Mvi-060327	Microbotryum violaceum	49.49	0.00e+00	891.00
IUUC-Mmr-061264	Microcebus murinus	43.87	0.00e+00	723.00
IUUC-Mdo-062327	Monodelphis domestica	42.80	0.00e+00	744.00
IUUC-Mmu-063542	Mus musculus	43.31	0.00e+00	728.00
IUUC-Mac-065142	Musa acuminata	41.61	0.00e+00	672.00
IUUC-Mpu-066098	Mustela putorius furo	43.82	0.00e+00	640.00
IUUC-Mlu-067056	Myotis lucifugus	39.45	0.00e+00	626.00
IUUC-Nfi-068323	Neosartorya fischeri	64.01	0.00e+00	1203.00
IUUC-Ncr-068925	Neurospora crassa	79.84	0.00e+00	1501.00
IUUC-Nle-068970	Nomascus leucogenys	43.45	0.00e+00	746.00
IUUC-Opr-070966	Ochotona princeps	57.32	1.00e-109	388.00
IUUC-Ont-071252	Oreochromis niloticus	42.63	0.00e+00	717.00
IUUC-Oan-072737	Ornithorhynchus anatinus	42.52	0.00e+00	718.00
IUUC-Oba-075794	Oryza barthii	39.56	0.00e+00	633.00
IUUC-Obr-076617	Oryza brachyantha	41.31	0.00e+00	667.00
IUUC-Ogl-077022	Oryza glaberrima	40.96	0.00e+00	669.00
IUUC-Ogu-078757	Oryza glumaepatula	32.06	2.00e-123	434.00
IUUC-Oin-079813	Oryza indica	40.96	0.00e+00	665.00
IUUC-Olo-080265	Oryza longistaminata	40.96	0.00e+00	667.00
IUUC-Ome-081494	Oryza meridionalis	40.62	0.00e+00	662.00
IUUC-Oni-082639	Oryza nivara	31.94	2.00e-122	431.00
IUUC-Opu-084005	Oryza punctata	41.18	0.00e+00	674.00
IUUC-Oru-084883	Oryza rufipogon	34.29	7.00e-88	317.00
IUUC-Osa-086158	Oryza sativa	40.74	0.00e+00	665.00
IUUC-Ola-086822	Oryzias latipes	42.71	0.00e+00	720.00
IUUC-Olu-087741	Ostreococcus lucimarinus	31.41	1.00e-22	97.40
IUUC-Oga-088887	Otolemur garnettii	43.40	0.00e+00	721.00
IUUC-Oar-090110	Ovis aries	42.21	0.00e+00	682.00
IUUC-Pan-092808	Papio anubis	44.14	0.00e+00	757.00
IUUC-Psi-093954	Pelodiscus sinensis	44.67	0.00e+00	766.00
IUUC-Pno-094922	Phaeosphaeria nodorum	66.93	0.00e+00	1242.00
IUUC-Ppa-095678	Physcomitrella patens	42.97	0.00e+00	659.00
IUUC-Pfo-097175	Poecilia formosa	43.16	0.00e+00	741.00
IUUC-Pab-098155	Pongo abelii	43.81	0.00e+00	749.00
IUUC-Pop-099635	Populus trichocarpa	39.69	0.00e+00	656.00
IUUC-Pca-100947	Procavia capensis	41.24	0.00e+00	677.00
IUUC-Ppe-101552	Prunus persica	41.61	0.00e+00	696.00
IUUC-Pva-102744	Pteropus vampyrus	39.87	0.00e+00	629.00
IUUC-Pgr-103389	Puccinia graminis	49.32	0.00e+00	834.00
IUUC-Ptt-103953	Puccinia triticina	41.51	0.00e+00	660.00
IUUC-Pte-104079	Pyrenophora teres	68.89	0.00e+00	1234.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	69.01	0.00e+00	1235.00
IUUC-Rno-105502	Rattus norvegicus	43.44	0.00e+00	751.00
IUUC-Sce-106390	Saccharomyces cerevisiae	53.00	0.00e+00	965.00
IUUC-Sha-107264	Sarcophilus harrisii	41.94	7.00e-89	319.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	54.45	0.00e+00	996.00
IUUC-Spo-108348	Schizosaccharomyces pombe	53.36	0.00e+00	956.00
IUUC-Smo-109327	Selaginella moellendorffii	41.69	0.00e+00	689.00
IUUC-Sit-110304	Setaria italica	41.37	0.00e+00	691.00
IUUC-Sly-111620	Solanum lycopersicum	45.65	2.00e-149	520.00
IUUC-Stu-112877	Solanum tuberosum	40.51	0.00e+00	698.00
IUUC-Sbi-114702	Sorghum bicolor	41.77	0.00e+00	675.00
IUUC-Sre-115129	Sporisorium reilianum	46.87	0.00e+00	802.00
IUUC-Ssc-115931	Sus scrofa	40.69	5.00e-87	313.00
IUUC-Tgu-116787	Taeniopygia guttata	42.26	0.00e+00	725.00
IUUC-Tru-118218	Takifugu rubripes	43.06	0.00e+00	726.00
IUUC-Tsy-119401	Tarsius syrichta	44.95	5.00e-118	417.00
IUUC-Tni-120046	Tetraodon nigroviridis	42.65	0.00e+00	695.00
IUUC-Tca-121685	Theobroma cacao	40.22	0.00e+00	695.00
IUUC-Tre-122154	Trichoderma reesei	79.23	0.00e+00	1420.00
IUUC-Tvi-122451	Trichoderma virens	79.23	0.00e+00	1412.00
IUUC-Tae-125397	Triticum aestivum	42.74	7.00e-111	393.00
IUUC-Tur-126650	Triticum urartu	41.47	1.00e-177	615.00
IUUC-Tme-127005	Tuber melanosporum	62.12	0.00e+00	1102.00
IUUC-Tbe-128102	Tupaia belangeri	43.05	3.00e-127	447.00
IUUC-Ttr-128259	Tursiops truncatus	43.76	0.00e+00	721.00
IUUC-Uma-129511	Ustilago maydis	47.73	0.00e+00	787.00
IUUC-Vda-129833	Verticillium dahliae	73.87	0.00e+00	1320.00
IUUC-Vvi-131572	Vitis vinifera	40.56	0.00e+00	648.00
IUUC-Xtr-131776	Xenopus tropicalis	32.47	6.00e-52	197.00
IUUC-Xma-133887	Xiphophorus maculatus	43.26	0.00e+00	716.00
IUUC-Yli-134427	Yarrowia lipolytica	55.14	0.00e+00	994.00
IUUC-Zma-135980	Zea mays	41.77	0.00e+00	664.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence