iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114393

UUCD1 version

UUC-SoB-01307

Ensembl Protein ID

Sb09g027550.1

UniProt Accession

C5YV09; C5YUZ1; C5YV09_SORBI

Genbank Protein ID

EES18624.1; EES19900.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768; CM000768

Gene Name

SORBI_009G221600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g027550	Sb09g027550.1	Sb09g027550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-09	39.6	329	370

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e+f   +++  l+CgH++h +C+++w       s++  CP+C+
   Q: 329  CSICQEEFeaNEETGKLSCGHTYHVHCIKQW------LSRKNACPVCK 370
           ********88444889***************......999999****7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MARDGGGGVG SPVAVRRRVA LRALLASGGQ AETEAARAPG MGLLRGLRCT SAAASQAIAP 60
ETPRPPADWR GLGCAAASQA HAPEAARPAA EWRGPLGCAS AAAAQANAPV GAPAPRRSEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCGCG ACGGAGGAGG AGGAGTAGGG TCACCGGTGG CGGTGCGGCG GAGGGTGGCG 60
CTGCGTGCGC TCCTCGCGTC GGGTGGTCAA GCGGAGACGG AGGCCGCGAG GGCGCCGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_09g027390; sbi:SORBI_09g027550

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006238	Arabidopsis lyrata	39.48	2.00e-40	158.00
IUUC-Ath-007418	Arabidopsis thaliana	40.71	7.00e-39	153.00
IUUC-Bdi-014468	Brachypodium distachyon	74.34	8.00e-81	292.00
IUUC-Bol-015289	Brassica oleracea	41.74	1.00e-40	159.00
IUUC-Bra-017781	Brassica rapa	40.77	8.00e-41	160.00
IUUC-Hvu-047064	Hordeum vulgare	68.86	7.00e-77	279.00
IUUC-Lpe-050885	Leersia perrieri	65.09	3.00e-71	260.00
IUUC-Mtr-058459	Medicago truncatula	40.79	8.00e-42	163.00
IUUC-Mac-064656	Musa acuminata	56.83	1.00e-58	219.00
IUUC-Oba-075799	Oryza barthii	78.08	3.00e-64	236.00
IUUC-Obr-076369	Oryza brachyantha	81.10	7.00e-60	222.00
IUUC-Ogl-077470	Oryza glaberrima	63.37	2.00e-69	255.00
IUUC-Ogu-078043	Oryza glumaepatula	63.37	1.00e-69	255.00
IUUC-Oin-079579	Oryza indica	65.43	1.00e-73	269.00
IUUC-Olo-080757	Oryza longistaminata	77.46	1.00e-63	234.00
IUUC-Ome-081356	Oryza meridionalis	67.08	4.00e-70	257.00
IUUC-Oni-082191	Oryza nivara	63.37	2.00e-69	255.00
IUUC-Opu-083409	Oryza punctata	61.47	3.00e-67	248.00
IUUC-Oru-084372	Oryza rufipogon	63.37	2.00e-69	255.00
IUUC-Osa-086205	Oryza sativa	63.37	2.00e-69	255.00
IUUC-Ola-087046	Oryzias latipes	35.00	2.00e-14	72.00
IUUC-Ppa-095313	Physcomitrella patens	52.00	4.00e-38	152.00
IUUC-Pfo-096103	Poecilia formosa	35.00	2.00e-14	72.40
IUUC-Smo-109387	Selaginella moellendorffii	54.55	2.00e-38	153.00
IUUC-Sit-110388	Setaria italica	89.24	4.00e-94	337.00
IUUC-Sly-111420	Solanum lycopersicum	45.18	1.00e-45	176.00
IUUC-Stu-112746	Solanum tuberosum	44.74	1.00e-45	176.00
IUUC-Tru-118133	Takifugu rubripes	36.00	1.00e-14	73.20
IUUC-Tae-123792	Triticum aestivum	71.30	2.00e-79	288.00
IUUC-Tur-126810	Triticum urartu	73.37	1.00e-64	238.00
IUUC-Xma-133967	Xiphophorus maculatus	35.00	2.00e-14	72.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence