iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007057

UUCD1 version

UUC-ArT-01444

Ensembl Protein ID

AT2G42620.1

UniProt Accession

Q9SIM9; Q947K3; MAX2_ARATH

Genbank Protein ID

AAK97303.1; AAD22992.2; AEC10149.1

Protein Name

F-box protein MAX2; F-box/LRR-repeat protein 7; Protein KARRIKIN INSENSITIVE 1; Protein MORE AXILLARY BRANCHING 2; Protein ORESARA 9

Genbank Nucleotide ID

AF305597; AC007087; CP002685

Gene Name

MAX2; FBL7; KAI1; ORE9; At2g42620; F14N22.11

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G42620	AT2G42620.1	AT2G42620.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein-protein Interaction
HINT	Mentha
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box	F-box	17346265; 18586868

Reviewed

Classification

Family	Identity	E-value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	46.95	6.00e-170	594.00	IUUC-Osa-085680

Organism

Arabidopsis thaliana

Functional Description
(View)

Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Promotes the senescence. Is necessary for responses to strigolactones and karrikins. Contributes to the selective repression of axillary shoots and moderates the branching by regulating negatively the auxin transport in primary stems, in an AXR1-independent manner (PubMed:11487692, PubMed:11874909, PubMed:15737939, PubMed:16546078, PubMed:22357928, PubMed:9351240). Required for the progression of leaf senescence mediated by methyl jasmonate (PubMed:26507893). Required at each node to suppress axillary bud growth (PubMed:17346265).

Protein Sequence
(Fasta)

MASTTLSDLP DVILSTISSL VSDSRARNSL SLVSHKFLAL ERSTRSHLTI RGNARDLSLV 60
PDCFRSISHL DLSFLSPWGH TLLASLPIDH QNLLALRLKF CFPFVESLNV YTRSPSSLEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCATCACGTG GCTCTCTCTC TGCCCAACAC AAATCTCTTC TTCTTCCTTC TTCCCTCTTT 60
CTTCTTCTAA AATCTCCTCT CTTGTAGATT TGCCGCTTCT CATGGCTTCC ACTACTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0217--Developmental protein
KW-0433--Leucine-rich repeat
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0833--Ubl conjugation pathway

Interpro

IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

SMART

SM00367--LRR_CC

Gene Ontology

GO:0005634--C:nucleus
GO:0019005--C:SCF ubiquitin ligase complex
GO:0009926--P:auxin polar transport
GO:0009734--P:auxin-activated signaling pathway
GO:0042335--P:cuticle development
GO:0010187--P:negative regulation of seed germination
GO:1902584--P:positive regulation of response to water deprivation
GO:0016567--P:protein ubiquitination
GO:0009934--P:regulation of meristem structural organization
GO:0009416--P:response to light stimulus
GO:0009414--P:response to water deprivation
GO:0010016--P:shoot system morphogenesis

KEGG

ath:AT2G42620

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000912	Aegilops tauschii	50.51	1.00e-101	363.00
IUUC-Atr-002917	Amborella trichopoda	49.93	5.00e-174	603.00
IUUC-Aly-006349	Arabidopsis lyrata	94.36	0.00e+00	1229.00
IUUC-Bdi-014544	Brachypodium distachyon	47.35	6.00e-164	570.00
IUUC-Bol-015747	Brassica oleracea	83.24	0.00e+00	1166.00
IUUC-Bra-017251	Brassica rapa	84.60	0.00e+00	1181.00
IUUC-Cpo-021605	Cavia porcellus	22.67	1.00e-06	48.90
IUUC-Gma-043976	Glycine max	59.35	0.00e+00	800.00
IUUC-Hvu-047568	Hordeum vulgare	48.11	2.00e-136	478.00
IUUC-Lpe-051227	Leersia perrieri	52.87	1.00e-112	398.00
IUUC-Mtr-058145	Medicago truncatula	59.92	0.00e+00	821.00
IUUC-Mac-064738	Musa acuminata	63.76	2.00e-82	298.00
IUUC-Oba-075679	Oryza barthii	48.46	7.00e-175	606.00
IUUC-Obr-076462	Oryza brachyantha	45.57	3.00e-152	531.00
IUUC-Ogu-078600	Oryza glumaepatula	46.51	1.00e-175	609.00
IUUC-Oin-079216	Oryza indica	49.44	4.00e-138	484.00
IUUC-Olo-080841	Oryza longistaminata	49.63	8.00e-141	493.00
IUUC-Ome-081978	Oryza meridionalis	41.93	6.00e-72	264.00
IUUC-Oni-082511	Oryza nivara	50.00	2.00e-136	478.00
IUUC-Opu-083879	Oryza punctata	49.90	1.00e-129	456.00
IUUC-Oru-084189	Oryza rufipogon	50.00	3.00e-136	478.00
IUUC-Osa-085680	Oryza sativa	47.11	1.00e-170	592.00
IUUC-Ptr-091045	Pan troglodytes	25.71	5.00e-05	43.50
IUUC-Ppa-095907	Physcomitrella patens	40.68	2.00e-81	296.00
IUUC-Pop-099037	Populus trichocarpa	61.41	0.00e+00	855.00
IUUC-Ppe-101483	Prunus persica	59.48	0.00e+00	823.00
IUUC-Ptt-103827	Puccinia triticina	34.62	8.20e-02	31.20
IUUC-Smo-109184	Selaginella moellendorffii	39.77	2.00e-127	448.00
IUUC-Sit-110373	Setaria italica	47.28	6.00e-167	580.00
IUUC-Sly-111608	Solanum lycopersicum	57.99	0.00e+00	800.00
IUUC-Stu-112390	Solanum tuberosum	60.25	0.00e+00	807.00
IUUC-Sbi-114083	Sorghum bicolor	47.28	5.00e-162	563.00
IUUC-Tca-121262	Theobroma cacao	62.61	0.00e+00	847.00
IUUC-Tae-124517	Triticum aestivum	46.54	1.00e-152	532.00
IUUC-Tur-126493	Triticum urartu	51.68	7.00e-79	286.00
IUUC-Vvi-131051	Vitis vinifera	58.79	0.00e+00	803.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence