iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113825

UUCD1 version

UUC-SoB-00039

Ensembl Protein ID

Sb10g005450.1

UniProt Accession

A0A194YHM1; A0A194YHM1_SORBI

Genbank Protein ID

KXG19469.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G063200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g005450	Sb10g005450.1	Sb10g005450.1
Sb10g005450	Sb10g005450.2	Sb10g005450.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-08	34.4	166	207

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f+ g  +  lpCgH fh +C   w        ++ rCP Cr
   Q: 166  CAVCLDEFRAGdvLAHLPCGHRFHWSCALPW------LEGTSRCPFCR 207
           ********66643444***************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MVIMAGMLPG VECARRRRLR QGAEAAGGGT RRSSFCLYAA GHGGAGGLGG GGNSGKQQRS 60
GVMEMIHGWT LDSNAREAKE RLDQKLRSKR EAAIKRHHST GSIKLSRPHR SGSGGTAASA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAACCAGAG GCGGCACTGC CATCATCAGC CCCCCATCAC TGCTGCTCAC AGTCGTCACC 60
CACCCCACCC CAGCCATACC AGAAGGGAGC AAGAAGACGA CGAGATGATG GCGGACGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000673	Aegilops tauschii	65.38	1.00e-30	124.00
IUUC-Atr-002911	Amborella trichopoda	45.00	2.00e-15	72.80
IUUC-Apl-004099	Anas platyrhynchos	45.00	2.00e-09	57.00
IUUC-Aly-006139	Arabidopsis lyrata	36.11	3.00e-27	114.00
IUUC-Ath-007567	Arabidopsis thaliana	36.41	4.00e-27	113.00
IUUC-Bdi-014038	Brachypodium distachyon	67.13	2.00e-59	221.00
IUUC-Bol-015257	Brassica oleracea	31.80	8.00e-23	99.00
IUUC-Bra-017025	Brassica rapa	32.26	8.00e-24	102.00
IUUC-Gmo-039251	Gadus morhua	52.27	7.00e-10	58.50
IUUC-Hvu-047185	Hordeum vulgare	68.46	4.00e-39	152.00
IUUC-Itr-048705	Ictidomys tridecemlineatus	46.67	2.00e-10	60.10
IUUC-Lpe-051053	Leersia perrieri	64.52	5.00e-52	196.00
IUUC-Mtr-058785	Medicago truncatula	36.49	1.00e-24	105.00
IUUC-Mac-064686	Musa acuminata	39.81	4.00e-29	119.00
IUUC-Oba-075651	Oryza barthii	67.74	2.00e-51	194.00
IUUC-Ogl-077891	Oryza glaberrima	67.74	2.00e-51	194.00
IUUC-Ogu-078446	Oryza glumaepatula	67.74	3.00e-52	197.00
IUUC-Oin-079883	Oryza indica	67.29	3.00e-50	190.00
IUUC-Ome-081697	Oryza meridionalis	67.42	6.00e-54	202.00
IUUC-Oni-082580	Oryza nivara	43.27	6.00e-25	105.00
IUUC-Opu-083785	Oryza punctata	66.97	5.00e-54	202.00
IUUC-Oru-084516	Oryza rufipogon	67.74	1.00e-52	198.00
IUUC-Osa-085652	Oryza sativa	50.72	3.00e-38	150.00
IUUC-Ppa-095736	Physcomitrella patens	42.86	4.00e-14	71.60
IUUC-Smo-109484	Selaginella moellendorffii	40.26	4.00e-14	68.20
IUUC-Sit-110449	Setaria italica	76.14	4.00e-68	249.00
IUUC-Tca-120960	Theobroma cacao	39.34	2.00e-35	141.00
IUUC-Tae-125500	Triticum aestivum	70.42	2.00e-55	207.00
IUUC-Tur-126628	Triticum urartu	53.69	6.00e-36	142.00
IUUC-Vvi-131648	Vitis vinifera	39.81	3.00e-35	140.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence