iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000183

Ensembl Protein ID

EMT12523

UniProt Accession

M8CBN4; M8CBN4_AEGTA

Genbank Protein ID

EMT12523.1

Protein Name

RING-H2 finger protein ATL4O

Genbank Nucleotide ID

KD550099

Gene Name

F775_14216

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_14216	EMT12523	EMT12523

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.40e-07	31.4	154	196

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle +   ++ ++ lp C H+fh  C+ +w         +++CP+Cr
   Q: 154  CAVCLEALsggEK-VRRLPvCAHTFHVGCIDMW------FHSHATCPVCR 196
           ******9988555.999999*************......9999******8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MSSTADLPRP ARGGGAFDFG QGSALVLASY PVLLLLVLLS AFVKYVWIAL ALCCAILFVL 60
SCTGRLLAGP VVFVHDEDTA AVERGGLSQA SIAAFPTFVY GAAASAGAGD GEAQCADTAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCGA CAGCGGACCT CCCGCGGCCT GCGCGCGGCG GCGGTGCCTT CGACTTCGGG 60
CAGGGCAGCG CGCTGGTGCT CGCGTCGTAC CCGGTGCTCC TGCTCCTCGT CCTTCTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_14216

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014245	Brachypodium distachyon	51.81	3.00e-31	127.00
IUUC-Hvu-047387	Hordeum vulgare	67.63	1.00e-55	207.00
IUUC-Lpe-050751	Leersia perrieri	69.39	2.00e-18	84.00
IUUC-Mtr-058540	Medicago truncatula	45.78	1.00e-18	85.50
IUUC-Mac-064688	Musa acuminata	53.75	6.00e-20	91.70
IUUC-Oba-074984	Oryza barthii	62.96	1.00e-16	79.70
IUUC-Ogl-077028	Oryza glaberrima	64.20	6.00e-21	93.20
IUUC-Ogu-078270	Oryza glumaepatula	61.63	4.00e-21	94.00
IUUC-Oin-079291	Oryza indica	47.12	1.00e-22	99.00
IUUC-Ome-081332	Oryza meridionalis	59.76	5.00e-19	87.00
IUUC-Oni-082817	Oryza nivara	61.63	4.00e-21	94.00
IUUC-Opu-083183	Oryza punctata	45.16	2.00e-23	101.00
IUUC-Oru-084821	Oryza rufipogon	47.26	4.00e-23	100.00
IUUC-Osa-085778	Oryza sativa	61.63	5.00e-21	93.60
IUUC-Pop-099960	Populus trichocarpa	48.81	1.00e-18	86.30
IUUC-Sit-110059	Setaria italica	42.33	3.00e-24	103.00
IUUC-Sbi-113901	Sorghum bicolor	51.76	6.00e-18	82.00
IUUC-Tae-124236	Triticum aestivum	79.33	5.00e-68	249.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence