iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017673

Ensembl Protein ID

Bra034692.1-P

UniProt Accession

M4F0U7; M4F0U7_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra034692	Bra034692.1	Bra034692.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-11	44.1	221	255

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gH+ +vt++af  +d +ll+s s Dg++ vW +++
   Q: 221  GHSQRVTDMAFfaHDvHLLASVSLDGKVFVWKISE 255
           8*********99*999***************9765 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MASSPGNTNP NNPPPFDLGT LFKPSSSPFP TPPASYPPPA GPFLQQPYAP PPPQQEAAPS 60
SSSSLLQQQR SLPFPSPPLN LLHSPSPSPS PRTSANHNPG THILALLNNN GGVNNQDPPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCTT CACCCGGTAA CACTAACCCC AACAATCCTC CGCCGTTCGA TCTCGGTACT 60
CTCTTCAAAC CTTCGTCGAG CCCTTTCCCC ACGCCGCCGG CGTCTTACCC TCCCCCCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000781	Aegilops tauschii	47.16	0.00e+00	1023.00
IUUC-Atr-002815	Amborella trichopoda	66.75	0.00e+00	630.00
IUUC-Aly-005827	Arabidopsis lyrata	79.55	0.00e+00	1846.00
IUUC-Ath-006603	Arabidopsis thaliana	78.65	0.00e+00	1860.00
IUUC-Bdi-014662	Brachypodium distachyon	49.35	0.00e+00	1022.00
IUUC-Bol-015150	Brassica oleracea	95.77	0.00e+00	2195.00
IUUC-Gma-044374	Glycine max	55.43	0.00e+00	1203.00
IUUC-Hvu-047656	Hordeum vulgare	47.85	0.00e+00	1046.00
IUUC-Lpe-051585	Leersia perrieri	49.18	0.00e+00	977.00
IUUC-Loc-051778	Lepisosteus oculatus	25.06	1.00e-25	112.00
IUUC-Mtr-057751	Medicago truncatula	55.12	0.00e+00	1149.00
IUUC-Mac-064436	Musa acuminata	50.20	0.00e+00	1063.00
IUUC-Oba-075599	Oryza barthii	65.93	1.00e-164	573.00
IUUC-Obr-076020	Oryza brachyantha	65.62	5.00e-166	578.00
IUUC-Ogl-077350	Oryza glaberrima	49.75	0.00e+00	1011.00
IUUC-Ogu-079010	Oryza glumaepatula	65.93	2.00e-164	573.00
IUUC-Oin-079723	Oryza indica	65.93	5.00e-165	575.00
IUUC-Olo-080788	Oryza longistaminata	65.61	3.00e-166	579.00
IUUC-Ome-081610	Oryza meridionalis	65.93	2.00e-164	573.00
IUUC-Oni-082323	Oryza nivara	49.10	0.00e+00	988.00
IUUC-Opu-084175	Oryza punctata	48.66	0.00e+00	992.00
IUUC-Oru-084677	Oryza rufipogon	49.55	0.00e+00	994.00
IUUC-Osa-085798	Oryza sativa	49.75	0.00e+00	1009.00
IUUC-Pop-100059	Populus trichocarpa	54.58	0.00e+00	1170.00
IUUC-Ppe-101310	Prunus persica	57.21	1.00e-178	620.00
IUUC-Sit-110590	Setaria italica	48.78	0.00e+00	1057.00
IUUC-Sly-111353	Solanum lycopersicum	54.17	0.00e+00	1171.00
IUUC-Sbi-114653	Sorghum bicolor	49.92	0.00e+00	1045.00
IUUC-Tca-121694	Theobroma cacao	55.91	0.00e+00	1252.00
IUUC-Tae-125495	Triticum aestivum	48.83	0.00e+00	1030.00
IUUC-Tur-126244	Triticum urartu	45.16	0.00e+00	956.00
IUUC-Vvi-130965	Vitis vinifera	57.74	0.00e+00	1264.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence