iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Hvu-047601

Ensembl Protein ID

MLOC_60212.1

UniProt Accession

F2DUB1; F2DUB1_HORVV

Genbank Protein ID

BAJ98682.1

Protein Name

Predicted protein

Genbank Nucleotide ID

AK367479

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MLOC_60212	MLOC_60212.1	MLOC_60212.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-08	36.0	85	127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl ++++g  ++vlp C H fh+ C+ +w       + + +CP+Cr
   Q: 85   CAVCLGEYDRGdvLRVLPdCAHSFHRPCVDQW------LRLRPSCPVCR 127
           ********88876888999*************......**********8 PP

Organism

Hordeum vulgare

Protein Sequence
(Fasta)

MAALEIAFAA ISVAVIIAIA YFLHTCSREA TPVPMPTPTP PGAQEAAAGD VELQAGMDEA 60
AISALPKVVV RGGAGAASSS SSTSCAVCLG EYDRGDVLRV LPDCAHSFHR PCVDQWLRLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACGTCTGAA ATCGATCGAT CAGCAGGCCG GCCGGAGTTG ACCCGCCGCC GGCGTGCCCC 60
GTGCGACCAC GGCCCCTCGA GCGACGGCGG GCCGTTCCCA TTCTTTTTCA GAATATAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014078	Brachypodium distachyon	45.05	2.00e-18	84.30
IUUC-Bol-015561	Brassica oleracea	47.22	8.00e-16	75.50
IUUC-Bra-017943	Brassica rapa	48.61	2.00e-16	77.00
IUUC-Gma-042745	Glycine max	52.00	3.00e-19	86.70
IUUC-Lpe-051665	Leersia perrieri	71.11	6.00e-18	84.30
IUUC-Mtr-058770	Medicago truncatula	46.67	3.00e-18	83.20
IUUC-Mac-065568	Musa acuminata	40.54	3.00e-13	66.60
IUUC-Oba-075041	Oryza barthii	52.17	3.00e-15	72.40
IUUC-Ogl-077698	Oryza glaberrima	65.15	2.00e-19	85.10
IUUC-Ogu-079023	Oryza glumaepatula	46.04	1.00e-21	95.90
IUUC-Oin-080189	Oryza indica	62.65	2.00e-22	95.10
IUUC-Ome-081751	Oryza meridionalis	42.25	2.00e-19	86.70
IUUC-Oni-082131	Oryza nivara	52.56	1.00e-17	80.90
IUUC-Opu-083765	Oryza punctata	67.61	2.00e-20	91.30
IUUC-Oru-084624	Oryza rufipogon	45.32	6.00e-21	93.20
IUUC-Osa-085714	Oryza sativa	53.16	4.00e-18	82.80
IUUC-Sit-109951	Setaria italica	79.07	8.00e-17	78.20
IUUC-Stu-112816	Solanum tuberosum	48.65	3.00e-18	83.20
IUUC-Tca-121049	Theobroma cacao	48.61	1.00e-17	81.30
IUUC-Tae-124362	Triticum aestivum	89.84	6.00e-38	147.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence