iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017175

Ensembl Protein ID

Bra024316.1-P

UniProt Accession

M4E6B2; M4E6B2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra024316	Bra024316.1	Bra024316.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-19	68.9	111	145

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H  +v +l++ +d  +l+sGs D+++ +WD+ +g 
   Q: 111  HRKDVLDLQWsPDdAFLISGSVDNSCIIWDVNKGS 145
           8889*******77799**************98876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MKGGTIQISW HDGKPVLTLD FHPVSGLLAT AGADYDIKLW LINSGQAEKK LPSVSYQSSL 60
TYHGCAVNTI RFSPSGELLA SGADGGELII WKLHPSETNQ SWKVHKSLSF HRKDVLDLQW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGGGAG GAACCATACA GATCAGCTGG CACGACGGGA AGCCTGTGCT CACCCTTGAT 60
TTTCACCCGG TTTCCGGTTT ACTCGCCACC GCCGGAGCCG ATTACGATAT CAAGGTAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0008283--P:cell proliferation
GO:0000724--P:double-strand break repair via homologous recombination
GO:0031507--P:heterochromatin assembly
GO:0048366--P:leaf development
GO:0009933--P:meristem structural organization
GO:0006334--P:nucleosome assembly
GO:0009555--P:pollen development
GO:0010026--P:trichome differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	56.06	2.00e-154	538.00
IUUC-Aml-001755	Ailuropoda melanoleuca	39.36	3.00e-77	282.00
IUUC-Atr-002674	Amborella trichopoda	60.86	5.00e-160	556.00
IUUC-Apl-003701	Anas platyrhynchos	39.41	6.00e-79	288.00
IUUC-Aca-004692	Anolis carolinensis	41.23	1.00e-82	300.00
IUUC-Aly-006286	Arabidopsis lyrata	87.76	0.00e+00	858.00
IUUC-Ath-007683	Arabidopsis thaliana	89.14	0.00e+00	868.00
IUUC-Ago-007940	Ashbya gossypii	32.83	3.00e-61	229.00
IUUC-Acl-008070	Aspergillus clavatus	40.72	2.00e-38	153.00
IUUC-Afl-008414	Aspergillus flavus	40.78	2.00e-39	157.00
IUUC-Ani-009399	Aspergillus nidulans	39.42	1.00e-37	151.00
IUUC-Ang-009650	Aspergillus niger	38.25	3.00e-36	146.00
IUUC-Aor-009937	Aspergillus oryzae	40.78	2.00e-39	157.00
IUUC-Ame-011094	Astyanax mexicanus	38.30	3.00e-85	309.00
IUUC-Bgr-012005	Blumeria graminis	37.37	7.00e-34	138.00
IUUC-Bta-013423	Bos taurus	39.08	3.00e-77	282.00
IUUC-Bci-013847	Botrytis cinerea	37.24	2.00e-34	140.00
IUUC-Bdi-014860	Brachypodium distachyon	66.92	4.00e-145	507.00
IUUC-Bol-016603	Brassica oleracea	92.71	0.00e+00	916.00
IUUC-Cel-018272	Caenorhabditis elegans	26.91	6.00e-36	144.00
IUUC-Cja-019558	Callithrix jacchus	40.05	1.00e-78	287.00
IUUC-Cfa-020900	Canis familiaris	39.04	4.00e-76	278.00
IUUC-Cpo-022054	Cavia porcellus	37.87	2.00e-67	249.00
IUUC-Csa-023850	Chlorocebus sabaeus	40.35	6.00e-80	291.00
IUUC-Cho-024510	Choloepus hoffmanni	31.89	2.00e-38	153.00
IUUC-Cin-025178	Ciona intestinalis	38.75	2.00e-74	272.00
IUUC-Cgl-026572	Colletotrichum gloeosporioides	39.63	2.00e-31	130.00
IUUC-Cne-027015	Cryptococcus neoformans	39.34	6.00e-31	129.00
IUUC-Cme-027136	Cyanidioschyzon merolae	32.29	3.00e-53	202.00
IUUC-Dre-027879	Danio rerio	36.83	2.00e-84	306.00
IUUC-Dno-029335	Dasypus novemcinctus	39.90	5.00e-79	288.00
IUUC-Dor-030520	Dipodomys ordii	30.08	1.00e-45	177.00
IUUC-Dse-031566	Dothistroma septosporum	39.80	7.00e-36	145.00
IUUC-Dme-031838	Drosophila melanogaster	38.15	3.00e-76	279.00
IUUC-Eca-033563	Equus caballus	39.60	2.00e-79	289.00
IUUC-Fca-036052	Felis catus	39.76	1.00e-78	286.00
IUUC-Fal-037080	Ficedula albicollis	35.92	7.00e-83	301.00
IUUC-Fox-038022	Fusarium oxysporum	39.61	4.00e-36	145.00
IUUC-Fso-038115	Fusarium solani	38.65	1.00e-34	141.00
IUUC-Gmo-039461	Gadus morhua	42.86	2.00e-63	235.00
IUUC-Ggr-040100	Gaeumannomyces graminis	36.89	9.00e-33	135.00
IUUC-Gga-041133	Gallus gallus	40.39	8.00e-80	290.00
IUUC-Gac-041769	Gasterosteus aculeatus	41.63	1.00e-83	303.00
IUUC-Gma-043339	Glycine max	69.66	7.00e-165	573.00
IUUC-Ggo-044561	Gorilla gorilla	40.60	6.00e-80	291.00
IUUC-Hsa-046150	Homo sapiens	40.10	2.00e-79	289.00
IUUC-Hvu-047792	Hordeum vulgare	66.30	3.00e-107	380.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	40.15	1.00e-79	290.00
IUUC-Kpa-049397	Komagataella pastoris	38.07	2.00e-65	243.00
IUUC-Lch-050365	Latimeria chalumnae	32.59	7.00e-53	201.00
IUUC-Lpe-050875	Leersia perrieri	54.91	2.00e-154	538.00
IUUC-Loc-052770	Lepisosteus oculatus	41.98	2.00e-84	306.00
IUUC-Lma-053291	Leptosphaeria maculans	37.73	7.00e-37	149.00
IUUC-Laf-053505	Loxodonta africana	39.90	6.00e-79	288.00
IUUC-Mcc-054803	Macaca mulatta	40.35	7.00e-80	291.00
IUUC-Meu-056578	Macropus eugenii	40.72	2.00e-37	149.00
IUUC-Mor-057211	Magnaporthe oryzae	37.06	3.00e-33	136.00
IUUC-Mpo-057411	Magnaporthe poae	36.89	3.00e-33	136.00
IUUC-Mtr-058066	Medicago truncatula	65.44	5.00e-159	554.00
IUUC-Mga-059735	Meleagris gallopavo	40.39	5.00e-80	291.00
IUUC-Mvi-060288	Microbotryum violaceum	26.20	1.00e-24	108.00
IUUC-Mmr-061343	Microcebus murinus	39.35	7.00e-79	287.00
IUUC-Mdo-062065	Monodelphis domestica	40.20	2.00e-78	286.00
IUUC-Mmu-063501	Mus musculus	40.39	1.00e-78	286.00
IUUC-Mac-064864	Musa acuminata	66.51	5.00e-167	580.00
IUUC-Mpu-066549	Mustela putorius furo	40.05	1.00e-79	290.00
IUUC-Mlu-067121	Myotis lucifugus	40.30	1.00e-80	293.00
IUUC-Nfi-068462	Neosartorya fischeri	39.32	3.00e-38	153.00
IUUC-Ncr-068838	Neurospora crassa	37.56	1.00e-33	138.00
IUUC-Nle-069854	Nomascus leucogenys	40.10	4.00e-79	288.00
IUUC-Opr-070803	Ochotona princeps	37.34	8.00e-75	274.00
IUUC-Ont-071642	Oreochromis niloticus	41.63	2.00e-84	306.00
IUUC-Oan-073675	Ornithorhynchus anatinus	40.74	2.00e-80	293.00
IUUC-Ocu-073863	Oryctolagus cuniculus	39.90	8.00e-77	280.00
IUUC-Oba-075682	Oryza barthii	52.69	1.00e-144	506.00
IUUC-Obr-076039	Oryza brachyantha	54.92	3.00e-153	534.00
IUUC-Ogu-078021	Oryza glumaepatula	54.23	6.00e-151	526.00
IUUC-Oin-079908	Oryza indica	56.06	8.00e-118	417.00
IUUC-Olo-081063	Oryza longistaminata	54.04	7.00e-151	526.00
IUUC-Ome-081930	Oryza meridionalis	54.23	3.00e-151	528.00
IUUC-Oni-082547	Oryza nivara	54.04	4.00e-150	524.00
IUUC-Opu-084089	Oryza punctata	65.31	9.00e-149	520.00
IUUC-Oru-084844	Oryza rufipogon	54.23	6.00e-151	526.00
IUUC-Osa-085582	Oryza sativa	54.23	6.00e-151	526.00
IUUC-Ola-087187	Oryzias latipes	40.89	8.00e-84	304.00
IUUC-Olu-087792	Ostreococcus lucimarinus	39.13	1.00e-73	270.00
IUUC-Oga-088390	Otolemur garnettii	39.35	3.00e-78	285.00
IUUC-Oar-089740	Ovis aries	38.61	8.00e-73	267.00
IUUC-Ptr-091581	Pan troglodytes	40.10	1.00e-79	290.00
IUUC-Pan-092258	Papio anubis	36.21	7.00e-67	248.00
IUUC-Psi-093761	Pelodiscus sinensis	34.76	2.00e-81	296.00
IUUC-Ppa-095428	Physcomitrella patens	47.43	3.00e-121	428.00
IUUC-Pfo-097357	Poecilia formosa	41.38	1.00e-84	307.00
IUUC-Pab-098520	Pongo abelii	40.10	5.00e-79	288.00
IUUC-Pop-099331	Populus trichocarpa	65.77	0.00e+00	632.00
IUUC-Ppe-101548	Prunus persica	59.10	0.00e+00	628.00
IUUC-Pva-103243	Pteropus vampyrus	39.22	2.00e-70	259.00
IUUC-Pgr-103591	Puccinia graminis	27.81	1.00e-27	118.00
IUUC-Pte-104247	Pyrenophora teres	40.10	1.00e-37	151.00
IUUC-Pyt-104641	Pyrenophora triticirepentis	40.10	1.00e-37	151.00
IUUC-Rno-105202	Rattus norvegicus	39.41	2.00e-78	286.00
IUUC-Sce-106250	Saccharomyces cerevisiae	36.14	4.00e-64	238.00
IUUC-Sha-107036	Sarcophilus harrisii	37.57	1.00e-79	290.00
IUUC-Sja-107912	Schizosaccharomyces japonicus	34.68	2.00e-64	239.00
IUUC-Spo-108050	Schizosaccharomyces pombe	31.52	4.00e-53	202.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	37.76	1.00e-34	141.00
IUUC-Sit-109838	Setaria italica	55.32	5.00e-154	537.00
IUUC-Sly-110872	Solanum lycopersicum	62.68	5.00e-170	590.00
IUUC-Stu-111933	Solanum tuberosum	61.71	9.00e-167	579.00
IUUC-Sbi-114587	Sorghum bicolor	55.17	2.00e-152	532.00
IUUC-Ssc-115462	Sus scrofa	37.80	3.00e-79	289.00
IUUC-Tgu-117186	Taeniopygia guttata	41.13	2.00e-82	299.00
IUUC-Tru-118310	Takifugu rubripes	41.87	1.00e-83	303.00
IUUC-Tni-120832	Tetraodon nigroviridis	40.49	3.00e-82	299.00
IUUC-Tca-121584	Theobroma cacao	68.66	0.00e+00	656.00
IUUC-Tre-122140	Trichoderma reesei	38.16	1.00e-34	140.00
IUUC-Tvi-122663	Trichoderma virens	39.49	3.00e-35	143.00
IUUC-Tae-123476	Triticum aestivum	56.26	6.00e-155	540.00
IUUC-Tur-126239	Triticum urartu	56.26	4.00e-155	541.00
IUUC-Tme-127108	Tuber melanosporum	36.85	6.00e-62	231.00
IUUC-Ttr-129010	Tursiops truncatus	40.40	1.00e-78	286.00
IUUC-Vda-129825	Verticillium dahliae	36.60	1.00e-32	134.00
IUUC-Vpa-130374	Vicugna pacos	37.04	2.00e-25	110.00
IUUC-Vvi-131136	Vitis vinifera	75.70	2.00e-177	615.00
IUUC-Xtr-132141	Xenopus tropicalis	39.11	4.00e-80	291.00
IUUC-Xma-133980	Xiphophorus maculatus	41.87	6.00e-85	308.00
IUUC-Yli-134457	Yarrowia lipolytica	36.57	1.00e-31	131.00
IUUC-Zma-135321	Zea mays	59.58	4.00e-147	514.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence