iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126718

Ensembl Protein ID

TRIUR3_31282-P1

UniProt Accession

M7ZKG1; M7ZKG1_TRIUA

Genbank Protein ID

EMS60597.1

Protein Name

Topless-related protein 1

Genbank Nucleotide ID

KD107247

Gene Name

TRIUR3_31282

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_31282	TRIUR3_31282-T1	TRIUR3_31282-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-18	67.2	452	487
UBD/Beta-Prp	4.40e-49	168.0	413	675

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd..tllvsGsdDgtikvWDlrtg 33
           H ++v+++af  ++    +++++dD+ ikvWD  +g
   Q: 452  HIGGVNDIAFshPNksLSIITCGDDKLIKVWDAQSG 487
           9999******995544559*************7665 PP

UBD/Beta-Prp

   S: 15   cvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
              +spd+++l +++  + ++ + + +       +++  h ++v+++ fs+  k   ++t+++D++ikvwd ++g+  +t++ghe+sv+s+  +
   Q: 413  RCLWSPDGNILGVAFSKHIVQTYTFVPNGElrqQAEIDAHIGGVNDIAFSHPNKslSIITCGDDKLIKVWDAQSGQKQYTFEGHEASVYSVCPH 506
           34459******************9988776566777899***********99998999********************************8555 PP
   S: 104  p..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtltgghtdsvyslsfdsn 191
              + +++ s+  d  i+ w  +      +  +   ++ ++++++ dg  l+s+++    D+ +  W+   g + rt  g  ++s   ++fd +
   Q: 507  YkeNIQFIFSTAIDGKIKAWLYDCLGSRVDY-DAPGHWCTTMSYSADGTRLFSCGTskdgDSHLVEWNETEGAIKRTYNGFRKRSLGVVQFDTT 599
           44388**************955544443324.4455699999999999888888654444566777*99************************* PP
   S: 192  gkelvsgsldgtvklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW.dlrsgdllktlqlhn 264
           +++++++++   vk+wd+ +++++ t  +    + s  +rf +++ +l++++ D+ i+i  +++ + ll++l+ ++
   Q: 600  RNHFLAAGDEFVVKFWDMDNTNILTTTDCEGGLPASprLRFNREGSLLAVTANDNGIKILaNTDGQRLLRMLESRA 675
           **************************9999988876226677*****************76888888888887766 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNMKH FEDLVQGGEW DEVERYLSGF 60
TKVEDNRYSM KIFFEIRKQK YLEALDRHDR AKAVEILVKD LKVFASFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCGC TCAGCAGGGA GCTGGTCTTC CTCATCCTGC AGTTCCTCGA CGAGGAAAAG 60
TTCAAGGAGA CGGTGCACAA GTAAGTGTCT CGTCTCGTCT GGTTGATCAA GACAAAGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011044--Quino_amine_DH_bsu
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000215	Aegilops tauschii	98.33	0.00e+00	2258.00
IUUC-Atr-003021	Amborella trichopoda	80.16	0.00e+00	1593.00
IUUC-Bdi-014941	Brachypodium distachyon	94.11	0.00e+00	2149.00
IUUC-Lpe-051683	Leersia perrieri	91.76	0.00e+00	2134.00
IUUC-Mac-064578	Musa acuminata	83.00	0.00e+00	1992.00
IUUC-Oba-075179	Oryza barthii	91.59	0.00e+00	2131.00
IUUC-Obr-076730	Oryza brachyantha	91.76	0.00e+00	2134.00
IUUC-Ogl-076958	Oryza glaberrima	91.76	0.00e+00	2178.00
IUUC-Ogu-078424	Oryza glumaepatula	91.59	0.00e+00	2131.00
IUUC-Oin-079972	Oryza indica	91.85	0.00e+00	2142.00
IUUC-Olo-080979	Oryza longistaminata	91.94	0.00e+00	2129.00
IUUC-Ome-081212	Oryza meridionalis	91.67	0.00e+00	2122.00
IUUC-Oni-082820	Oryza nivara	91.59	0.00e+00	2131.00
IUUC-Opu-083223	Oryza punctata	89.16	0.00e+00	2050.00
IUUC-Oru-084418	Oryza rufipogon	90.31	0.00e+00	2127.00
IUUC-Osa-086275	Oryza sativa	91.85	0.00e+00	2142.00
IUUC-Ppa-095814	Physcomitrella patens	69.84	0.00e+00	1556.00
IUUC-Sit-110121	Setaria italica	91.50	0.00e+00	2105.00
IUUC-Sly-111268	Solanum lycopersicum	74.65	0.00e+00	1768.00
IUUC-Sbi-114032	Sorghum bicolor	90.48	0.00e+00	2076.00
IUUC-Tca-121774	Theobroma cacao	76.01	0.00e+00	1751.00
IUUC-Tae-125673	Triticum aestivum	98.33	0.00e+00	2258.00
IUUC-Vvi-131109	Vitis vinifera	77.73	0.00e+00	1837.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence