iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131109

Ensembl Protein ID

VIT_16s0039g02410.t01

UniProt Accession

D7T7T3; D7T7T3_VITVI

Genbank Protein ID

CBI26554.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595750

Gene Name

VIT_16s0039g02410

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_16s0039g02410	VIT_16s0039g02410.t01	VIT_16s0039g02410.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-19	68.5	451	488
UBD/Beta-Prp	5.80e-55	187.1	403	658

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtgvl 35
           H ++v+++af  ++  l +v+++dD+tikvWD  tg+ 
   Q: 451  HIGGVNDVAFahPNkQLcIVTCGDDKTIKVWDAQTGRR 488
           9999*******97653359*************999875 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrs.l..sgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcv 87
           lk++ +sv +cv   pd+ +l +++  + ++++ + +   lr+ l    h ++v++v f +  k   +vt+++D+tikvwd +tg  +
   Q: 403  LKDATISVNRCVWG-PDGLILGVAFSKHIVQIYTYNPTGELRQhLeiDAHIGGVNDVAFAHPNKqlCIVTCGDDKTIKVWDAQTGRRL 489
           67788888887766.999999999999999****9987765441333889999******99888899********************* PP
   S: 88   htlkghedsvlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsG..slDrtvrl..Wdlktg 169
           +t++ghe+ v+s+  +   + +++ s+  d  i+ w  +      +  +   ++ ++++++ dg  l+s+  s+D+   l  W+ + g
   Q: 490  YTFEGHEAPVYSVCPHYkeNIQFIFSTAIDGKIKAWLYDCLGSRVDY-DAPGHWCTMMAYSADGTRLFSCgtSKDGESHLveWNESEG 576
           ***********9855544388**************955544444324.4455699999****9*888888334566544333999*** PP
   S: 170  kllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW 249
            + rt  g  ++s   ++fd ++++++++++  ++k+wd+ +++++ ++++    + s  +rf +++ +l++++ D+ i+i 
   Q: 577  AIKRTYLGFRKRSLGVVQFDTTRNRFLAAGDEFQIKFWDMDNTNILTAVEAEGGLPASprLRFNKEGSLLAVTTNDNGIKIL 658
           ********9************************************9999999988776226677999************995 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKH FEDQVQAGEW DEVERYLCGF 60
TKVEDNRYSM KIFFEIRKQK YLEALDRQDR AKAVEILVKD LKVFASFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGGACGAT GTCGTCGCTG AGTAGGGAAC TGGTATTTTT AATATTACAG TTCTTGGACG 60
AGGAGAAGTT CAAGGAAACT GTTCATAAGT AAGTTTGCTG TGATGTTGGT TGGATGATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011044--Quino_amine_DH_bsu
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

vvi:100251131

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000215	Aegilops tauschii	80.05	0.00e+00	1875.00
IUUC-Atr-003021	Amborella trichopoda	83.93	0.00e+00	1636.00
IUUC-Bdi-014941	Brachypodium distachyon	79.52	0.00e+00	1855.00
IUUC-Lpe-051683	Leersia perrieri	79.44	0.00e+00	1883.00
IUUC-Mac-064578	Musa acuminata	80.44	0.00e+00	1921.00
IUUC-Oba-075179	Oryza barthii	79.17	0.00e+00	1883.00
IUUC-Obr-076730	Oryza brachyantha	79.35	0.00e+00	1882.00
IUUC-Ogl-076958	Oryza glaberrima	80.23	0.00e+00	1925.00
IUUC-Ogu-078424	Oryza glumaepatula	79.17	0.00e+00	1883.00
IUUC-Oin-079972	Oryza indica	79.44	0.00e+00	1891.00
IUUC-Olo-080979	Oryza longistaminata	79.35	0.00e+00	1885.00
IUUC-Ome-081212	Oryza meridionalis	79.17	0.00e+00	1875.00
IUUC-Oni-082820	Oryza nivara	79.17	0.00e+00	1883.00
IUUC-Opu-083223	Oryza punctata	77.64	0.00e+00	1814.00
IUUC-Oru-084418	Oryza rufipogon	78.09	0.00e+00	1876.00
IUUC-Osa-086275	Oryza sativa	79.44	0.00e+00	1891.00
IUUC-Ppa-095845	Physcomitrella patens	71.72	0.00e+00	1620.00
IUUC-Smo-109119	Selaginella moellendorffii	69.12	0.00e+00	1501.00
IUUC-Sit-110121	Setaria italica	80.41	0.00e+00	1873.00
IUUC-Sly-111268	Solanum lycopersicum	79.40	0.00e+00	1885.00
IUUC-Sbi-114032	Sorghum bicolor	78.46	0.00e+00	1817.00
IUUC-Tca-121774	Theobroma cacao	85.86	0.00e+00	1969.00
IUUC-Tae-125673	Triticum aestivum	80.05	0.00e+00	1875.00
IUUC-Tur-126718	Triticum urartu	78.85	0.00e+00	1837.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence