iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057647

Ensembl Protein ID

KEH25207

UniProt Accession

G7ZV10; G7ZV10_MEDTR

Genbank Protein ID

KEH25207.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001222

Gene Name

MTR_6g016350

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_6g016350	KEH25207	KEH25207

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-06	30.0	311	352

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+++   ++ +  lpC H++h dC+  w       + + +CP+Cr
   Q: 311  CAVCKDEVtvEEKVGKLPCSHCYHGDCILPW------LNIRNTCPVCR 352
           ******9988555999***************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSRYSSSNPF ATITTNSLYS DSDTDSLSQF VTDLYQNRSP TDPSCPWDDE EDTRINPFSN 60
IADFHQGEPE LGLGLGFDVE YEYENETQYN DDNYDDVFDF SSLVGGGGDS GGLRVVEFGT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTCACACA CGTACACAAA AACACAACAC AAACCACAGA AAAACAAAAC AACAAGAAGA 60
TTCACAGAAT CAAACAATCA CAAACACAAA AAACATGTCT CGTTATTCCT CTTCAAATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_6g016350

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005543	Arabidopsis lyrata	52.32	2.00e-35	142.00
IUUC-Ath-006960	Arabidopsis thaliana	50.33	1.00e-33	136.00
IUUC-Bol-015267	Brassica oleracea	46.53	4.00e-28	118.00
IUUC-Bra-017949	Brassica rapa	47.62	3.00e-30	125.00
IUUC-Gma-043441	Glycine max	44.60	2.00e-54	206.00
IUUC-Oba-075271	Oryza barthii	47.17	2.00e-20	92.00
IUUC-Ome-081782	Oryza meridionalis	43.23	2.00e-23	102.00
IUUC-Ppe-101891	Prunus persica	45.83	3.00e-38	151.00
IUUC-Sit-110400	Setaria italica	49.33	2.00e-27	115.00
IUUC-Sly-110977	Solanum lycopersicum	60.00	8.00e-41	160.00
IUUC-Stu-112415	Solanum tuberosum	55.03	7.00e-40	157.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence