iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114534

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G219000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g028550	Sb07g028550.1	Sb07g028550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-06	28.9	306	338

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ +d +++++G+ D+t++vWD+r
   Q: 306  GHLDYSFASAWnPDgRTFATGNQDKTCRVWDIR 338
           799999999***99999**************86 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSQHDDDLAG VHSEEGDRHG VVMDDSDYED DELDQSTSKA TEHITAMDVK KGKDIQGIPW 60
DMMATTRDKY RQSRLQRYAN FENVPNSGRI SEKECMPAEK GQLYYEFQHS TRSVKSTILH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCCGGTTG CTTTCCTTCC AGAACCAGAT CCCAACAATA AATCCAAGCG TGCTCCTTCC 60
CTGGACACTG AATCATCAAG GCGGAGCGTC CTTTCAGCAA AATTTCCCGA GACCTCGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sbi:SORBI_07g028550

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001145	Aegilops tauschii	72.83	0.00e+00	686.00
IUUC-Bdi-014130	Brachypodium distachyon	76.78	0.00e+00	716.00
IUUC-Cre-022745	Chlamydomonas reinhardtii	28.91	3.00e-24	104.00
IUUC-Dse-031456	Dothistroma septosporum	29.66	2.00e-41	162.00
IUUC-Hvu-047631	Hordeum vulgare	76.54	0.00e+00	711.00
IUUC-Lpe-051175	Leersia perrieri	73.00	0.00e+00	688.00
IUUC-Oba-075962	Oryza barthii	72.17	0.00e+00	651.00
IUUC-Obr-076195	Oryza brachyantha	75.29	0.00e+00	712.00
IUUC-Ogl-077207	Oryza glaberrima	75.47	0.00e+00	691.00
IUUC-Ogu-078765	Oryza glumaepatula	72.64	0.00e+00	655.00
IUUC-Oin-079991	Oryza indica	75.71	0.00e+00	696.00
IUUC-Olo-080659	Oryza longistaminata	69.42	3.00e-169	586.00
IUUC-Ome-081872	Oryza meridionalis	73.01	0.00e+00	654.00
IUUC-Oni-082042	Oryza nivara	72.17	0.00e+00	652.00
IUUC-Opu-083680	Oryza punctata	74.19	0.00e+00	698.00
IUUC-Oru-084444	Oryza rufipogon	72.41	0.00e+00	656.00
IUUC-Osa-086083	Oryza sativa	75.71	0.00e+00	696.00
IUUC-Tae-124470	Triticum aestivum	78.03	0.00e+00	722.00
IUUC-Tur-126168	Triticum urartu	78.03	0.00e+00	706.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence