iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080997

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMDW01040938.1_FG001	AMDW01040938.1_FGT001	AMDW01040938.1_FGP001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.50e-07	31.7	295	336

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ +  +d+++ lpC H+fh +C+ kw       + ++ CPlC+
   Q: 295  CCICLTKYgdDDELRELPCTHFFHVQCVDKW------LKINAVCPLCK 336
           ********99777******************......**********7 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MEKLHQHQPV IKICTVIQMI HIRMIGLQQA HKPHHHSLQH QLRPLHITPE IYPFLEEIIV 60
AAIFVLVFSR DEHPHAPLFA WIIGYTIGCI ASIPLICWRC AHRNRPSEQE PEQPPAAYPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAAAC TGCATCAACA TCAACCAGTC ATCAAGATTT GCACAGTGAT TCAGATGATT 60
CACATCAGGA TGATAGGCCT TCAACAAGCA CACAAACCCC ATCACCACAG TCTTCAGCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000682	Aegilops tauschii	79.79	3.00e-163	566.00
IUUC-Bdi-014014	Brachypodium distachyon	87.32	6.00e-142	496.00
IUUC-Ete-032882	Echinops telfairi	32.17	1.00e-13	71.20
IUUC-Lpe-051240	Leersia perrieri	91.95	5.00e-156	543.00
IUUC-Oba-075173	Oryza barthii	99.67	4.00e-176	609.00
IUUC-Obr-076511	Oryza brachyantha	94.92	1.00e-171	595.00
IUUC-Ogl-077768	Oryza glaberrima	99.67	4.00e-176	609.00
IUUC-Ogu-079003	Oryza glumaepatula	99.34	7.00e-177	613.00
IUUC-Oin-080078	Oryza indica	96.55	6.00e-177	612.00
IUUC-Ome-081347	Oryza meridionalis	98.81	0.00e+00	666.00
IUUC-Oni-082074	Oryza nivara	100.00	3.00e-177	613.00
IUUC-Opu-083173	Oryza punctata	99.01	5.00e-175	606.00
IUUC-Oru-084340	Oryza rufipogon	100.00	3.00e-177	613.00
IUUC-Osa-085476	Oryza sativa	96.55	6.00e-177	612.00
IUUC-Pma-094624	Petromyzon marinus	30.13	2.00e-12	67.00
IUUC-Pno-095054	Phaeosphaeria nodorum	29.75	5.00e-10	58.50
IUUC-Sit-109799	Setaria italica	86.20	2.00e-146	511.00
IUUC-Sbi-114293	Sorghum bicolor	86.87	4.00e-146	509.00
IUUC-Tru-118277	Takifugu rubripes	31.40	5.00e-14	71.60
IUUC-Tae-125590	Triticum aestivum	84.97	5.00e-149	519.00
IUUC-Tur-126401	Triticum urartu	65.57	2.00e-146	512.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence