iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112318

Ensembl Protein ID

PGSC0003DMT400015787

UniProt Accession

M1A6L2; M1A6L2_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400006171	PGSC0003DMT400015786	PGSC0003DMT400015786
PGSC0003DMG400006171	PGSC0003DMT400015787	PGSC0003DMT400015787

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.00e-31	105.8	301	334

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           Htd+v+ +++  +  t l+s+++D  ++vWDl +
   Q: 301  HTDEVFQVEWdpNHeTVLASSGGDRRLMVWDLNR 334
           ***********644799**************965 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAEEEMEAAG ETEQEVEEEF AVWKKNTPLL YDLVVCHALE WPSLTVQWLP SPTTDDGAFA 60
VHKLILGTHT SDDCPNFLMV ANVHLPRNPA SGLEHNLMNP QIPKVEIVQK IHVDGEVNRA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCCAACCG CCTTTCGTAG ACTCCATTTT CCATTTTTGG CGGGAAACAG AAAACCCTCA 60
TTCTCCATCA ACAATGGCAG AAGAAGAAAT GGAGGCGGCG GGAGAAACCG AACAAGAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

sot:102599978

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005708	Arabidopsis lyrata	70.98	3.00e-159	553.00
IUUC-Ath-007342	Arabidopsis thaliana	71.20	3.00e-159	553.00
IUUC-Bol-016584	Brassica oleracea	71.20	1.00e-154	538.00
IUUC-Bra-016771	Brassica rapa	71.20	1.00e-157	547.00
IUUC-Gma-043256	Glycine max	68.49	8.00e-147	511.00
IUUC-Mtr-058292	Medicago truncatula	67.62	2.00e-143	500.00
IUUC-Oba-075939	Oryza barthii	58.33	2.00e-119	421.00
IUUC-Ogu-078437	Oryza glumaepatula	59.09	8.00e-120	422.00
IUUC-Oin-079872	Oryza indica	59.63	5.00e-121	426.00
IUUC-Oni-082852	Oryza nivara	59.63	5.00e-121	426.00
IUUC-Opu-083343	Oryza punctata	57.75	6.00e-118	416.00
IUUC-Pop-099884	Populus trichocarpa	71.39	3.00e-164	570.00
IUUC-Ppe-101659	Prunus persica	73.56	1.00e-156	544.00
IUUC-Sly-111542	Solanum lycopersicum	98.18	0.00e+00	785.00
IUUC-Tca-121803	Theobroma cacao	71.69	7.00e-163	565.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence