iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016980

Ensembl Protein ID

Bra015751.1-P

UniProt Accession

M4DGX5; M4DGX5_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra015751	Bra015751.1	Bra015751.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.80e-09	38.3	108	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f   d+++vlp CgH fh  C+  w         + +CP Cr
   Q: 108  CAICLTEFaaGDELRVLPqCGHGFHVACIDTW------LGSHSSCPSCR 150
           ********88555*******************......99********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MARLLFRLLQ EATPPSPAKA SPTLNSDLIV IIAALLCALI CVLGLVAVSR CSWLRRIAAS 60
RSSAANSDQN PQPPVAAANK GLKKKVLRSL SKLTYSPDSP QAEKLAECAI CLTEFAAGDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCGTC TTCTCTTTCG TCTCCTTCAA GAAGCCACTC CTCCGTCGCC GGCCAAAGCT 60
TCTCCGACGT TAAACTCTGA CCTCATAGTC ATCATAGCAG CTCTCCTCTG CGCACTGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014058	Brachypodium distachyon	60.47	4.00e-25	107.00
IUUC-Bol-016328	Brassica oleracea	93.72	2.00e-69	254.00
IUUC-Hvu-047500	Hordeum vulgare	76.60	4.00e-19	85.90
IUUC-Oba-075079	Oryza barthii	63.33	3.00e-12	65.10
IUUC-Ogl-077873	Oryza glaberrima	63.33	3.00e-12	65.10
IUUC-Ogu-078432	Oryza glumaepatula	63.33	3.00e-12	65.10
IUUC-Oin-080192	Oryza indica	63.33	3.00e-12	65.50
IUUC-Oru-084251	Oryza rufipogon	63.33	3.00e-12	65.10
IUUC-Sbi-114504	Sorghum bicolor	60.00	9.00e-23	99.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence