iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095797

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544963

Gene Name

PHYPADRAFT_78861

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S74_200V6	PP1S74_200V6.1	PP1S74_200V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	1.00e-05	26.4	9	57

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 95   eegpdaglldrlpeeilveilklldkeellraarvcrrwqelasqkalw 143
           e  + +++++ lp++i +++l +l+ ++l ra+ vc++w+ l+s+++++
   Q: 9    ESVSTSDVWSMLPKDIAMRVLARLSVPQLFRARTVCKQWNLLTSSPEFL 57
           445678999*******************************999877765 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MASSPEQNES VSTSDVWSML PKDIAMRVLA RLSVPQLFRA RTVCKQWNLL TSSPEFLNLF 60
SGQSHEPYFP IMTSRSFMAR CPDQQYNPEQ AVNSLFNGFF GYNHTTETWQ RLPPLDFLPR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCTT CACCTGAACA GAACGAATCC GTTTCTACGT CGGATGTGTG GAGCATGTTA 60
CCTAAAGATA TTGCTATGAG AGTGTTGGCG CGACTATCAG TGCCTCAACT TTTTCGTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box

SMART

SM00256--FBOX

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_78861

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006433	Arabidopsis lyrata	27.74	6.00e-07	48.10
IUUC-Ang-009828	Aspergillus niger	36.17	8.00e-03	33.90
IUUC-Oba-075931	Oryza barthii	25.40	5.00e-09	54.30
IUUC-Ogl-077337	Oryza glaberrima	24.87	7.00e-09	53.90
IUUC-Ogu-077953	Oryza glumaepatula	34.69	2.00e-04	40.80
IUUC-Oin-079568	Oryza indica	25.68	4.00e-09	53.90
IUUC-Oni-082367	Oryza nivara	22.14	6.00e-07	49.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence