iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007414

Ensembl Protein ID

AT5G21140.1

UniProt Accession

Q84VP9; Q84VP9_ARATH

Genbank Protein ID

AAO73901.1; AAS76229.1; AAS92326.1; AED92939.1

Protein Name

At5g21140; Embryo defective 1379; Putative uncharacterized protein At5g21140

Genbank Nucleotide ID

AC140977; BT012134; BT012410; CP002688

Gene Name

emb1379; embryo defective 1379; At5g21140

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G21140	AT5G21140.1	AT5G21140.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	24.90	2.00e-12	70.90	IUUC-Hsa-046194

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MASLSWKHHT LIQALISRGP LKEKEFHSIF TAVTGRNPVT VKKIFDKYLL EINKELSYVH 60
FELKACRDQY DGQVCYGVVN NVADDQSKLG TKYSVPQIAF FKGIIEAIAQ DEAAQGCISS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATAATTTT ATGGCGTCAT CGTGTCGATA ACGCTTCCCG CCATTCCGTC TCTCTCTCAC 60
CGCACTTTCT GTCTCCCCAA CAAATACAAA ACCCTAATTC ACAGAAACAA TCAGGGTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011513--Nse1
IPR014857--Znf_RING-like
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF07574--SMC_Nse1
PF08746--zf-RING-like

Gene Ontology

GO:0005634--C:nucleus
GO:0030915--C:Smc5-Smc6 complex
GO:0004842--F:ubiquitin-protein transferase activity
GO:0000724--P:double-strand break repair via homologous recombination
GO:0006301--P:postreplication repair
GO:0016567--P:protein ubiquitination

KEGG

ath:AT5G21140

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000235	Aegilops tauschii	50.18	1.00e-78	285.00
IUUC-Aml-002226	Ailuropoda melanoleuca	23.49	1.00e-13	68.90
IUUC-Atr-003071	Amborella trichopoda	54.46	4.00e-92	330.00
IUUC-Apl-003221	Anas platyrhynchos	21.60	4.00e-12	64.30
IUUC-Aca-004369	Anolis carolinensis	25.71	4.00e-16	77.40
IUUC-Aly-005460	Arabidopsis lyrata	74.81	6.00e-109	386.00
IUUC-Acl-008122	Aspergillus clavatus	24.39	6.00e-17	80.90
IUUC-Afl-008641	Aspergillus flavus	23.05	3.00e-18	85.10
IUUC-Afu-008941	Aspergillus fumigatus	24.42	3.00e-19	88.20
IUUC-Ang-009852	Aspergillus niger	22.79	2.00e-13	69.70
IUUC-Aor-010041	Aspergillus oryzae	23.05	3.00e-18	85.10
IUUC-Ame-011050	Astyanax mexicanus	21.22	3.00e-13	68.20
IUUC-Bgr-012061	Blumeria graminis	24.08	6.00e-17	80.90
IUUC-Bta-012376	Bos taurus	24.03	2.00e-12	64.70
IUUC-Bci-013706	Botrytis cinerea	23.26	3.00e-15	75.10
IUUC-Bdi-014858	Brachypodium distachyon	58.63	1.00e-86	311.00
IUUC-Bol-015509	Brassica oleracea	87.13	1.00e-121	428.00
IUUC-Bra-017956	Brassica rapa	84.71	2.00e-128	450.00
IUUC-Cja-019666	Callithrix jacchus	25.10	2.00e-11	62.40
IUUC-Cfa-020418	Canis familiaris	24.46	2.00e-14	72.00
IUUC-Cpo-022527	Cavia porcellus	24.59	3.00e-12	65.10
IUUC-Csa-023268	Chlorocebus sabaeus	26.04	4.00e-16	77.80
IUUC-Cgl-026400	Colletotrichum gloeosporioides	24.71	7.00e-15	73.90
IUUC-Cne-027096	Cryptococcus neoformans	20.00	1.00e-10	60.10
IUUC-Dre-028628	Danio rerio	20.59	2.00e-11	61.60
IUUC-Dno-029636	Dasypus novemcinctus	24.51	4.00e-14	71.20
IUUC-Dor-030523	Dipodomys ordii	25.61	5.00e-14	70.50
IUUC-Dse-031163	Dothistroma septosporum	21.21	2.00e-17	82.40
IUUC-Dme-032062	Drosophila melanogaster	29.17	5.00e-03	33.90
IUUC-Ete-032673	Echinops telfairi	23.77	2.00e-14	72.00
IUUC-Eca-034155	Equus caballus	25.20	5.00e-14	70.90
IUUC-Eeu-034647	Erinaceus europaeus	23.87	3.00e-14	70.90
IUUC-Fca-036073	Felis catus	23.55	7.00e-09	53.50
IUUC-Fal-037212	Ficedula albicollis	22.89	1.00e-11	62.80
IUUC-Fox-037947	Fusarium oxysporum	23.08	7.00e-16	77.40
IUUC-Fso-038221	Fusarium solani	22.99	7.00e-15	73.90
IUUC-Gmo-039682	Gadus morhua	21.20	1.00e-14	72.80
IUUC-Ggr-039809	Gaeumannomyces graminis	20.71	3.00e-11	62.40
IUUC-Gga-040407	Gallus gallus	22.22	5.00e-11	60.80
IUUC-Gac-042107	Gasterosteus aculeatus	20.58	1.00e-11	62.80
IUUC-Gma-043783	Glycine max	54.74	7.00e-88	316.00
IUUC-Ggo-044492	Gorilla gorilla	26.74	1.00e-16	79.30
IUUC-Hsa-046194	Homo sapiens	26.39	1.00e-16	79.70
IUUC-Hvu-047237	Hordeum vulgare	57.26	4.00e-86	310.00
IUUC-Itr-048287	Ictidomys tridecemlineatus	24.70	1.00e-13	69.70
IUUC-Kpa-049342	Komagataella pastoris	23.94	8.00e-07	46.60
IUUC-Lch-049840	Latimeria chalumnae	22.22	2.00e-16	78.60
IUUC-Lpe-051000	Leersia perrieri	56.83	2.00e-92	332.00
IUUC-Loc-052108	Lepisosteus oculatus	23.05	4.00e-16	77.80
IUUC-Lma-053012	Leptosphaeria maculans	20.33	3.00e-13	68.60
IUUC-Laf-054200	Loxodonta africana	25.52	2.00e-15	75.50
IUUC-Meu-056409	Macropus eugenii	17.99	3.00e-07	47.80
IUUC-Mor-056929	Magnaporthe oryzae	21.80	4.00e-12	64.70
IUUC-Mpo-057365	Magnaporthe poae	20.88	7.00e-10	57.40
IUUC-Mtr-057860	Medicago truncatula	54.96	2.00e-87	315.00
IUUC-Mla-059092	Melampsora laricipopulina	22.05	3.00e-07	48.50
IUUC-Mga-059471	Meleagris gallopavo	22.13	7.00e-13	66.60
IUUC-Mvi-060458	Microbotryum violaceum	23.30	8.00e-07	47.40
IUUC-Mmr-060817	Microcebus murinus	25.61	2.00e-15	75.10
IUUC-Mdo-062697	Monodelphis domestica	21.99	8.00e-14	70.50
IUUC-Mmu-064233	Mus musculus	25.80	3.00e-15	74.70
IUUC-Mac-065253	Musa acuminata	49.71	2.00e-91	328.00
IUUC-Mpu-066266	Mustela putorius furo	24.47	3.00e-14	71.60
IUUC-Mlu-068073	Myotis lucifugus	24.29	4.00e-14	70.90
IUUC-Nfi-068425	Neosartorya fischeri	25.61	3.00e-19	88.60
IUUC-Ncr-068940	Neurospora crassa	21.07	2.00e-10	59.30
IUUC-Nle-069922	Nomascus leucogenys	25.69	2.00e-15	75.90
IUUC-Ont-071615	Oreochromis niloticus	21.32	4.00e-12	64.30
IUUC-Oan-073522	Ornithorhynchus anatinus	21.72	3.00e-06	44.30
IUUC-Ocu-074543	Oryctolagus cuniculus	23.24	2.00e-15	75.50
IUUC-Oba-075231	Oryza barthii	52.26	9.00e-90	322.00
IUUC-Obr-076211	Oryza brachyantha	58.15	8.00e-92	329.00
IUUC-Ogl-077548	Oryza glaberrima	51.94	2.00e-89	321.00
IUUC-Ogu-078723	Oryza glumaepatula	54.26	2.00e-90	324.00
IUUC-Oin-079772	Oryza indica	54.26	3.00e-90	324.00
IUUC-Olo-080397	Oryza longistaminata	56.45	4.00e-79	287.00
IUUC-Ome-081537	Oryza meridionalis	47.08	2.00e-78	285.00
IUUC-Oni-082597	Oryza nivara	54.26	3.00e-90	324.00
IUUC-Opu-083649	Oryza punctata	51.94	6.00e-92	330.00
IUUC-Oru-084611	Oryza rufipogon	54.26	3.00e-90	324.00
IUUC-Osa-086105	Oryza sativa	54.26	3.00e-90	324.00
IUUC-Oga-088199	Otolemur garnettii	25.86	3.00e-17	81.30
IUUC-Oar-089966	Ovis aries	24.49	9.00e-09	53.10
IUUC-Ptr-090997	Pan troglodytes	26.39	3.00e-16	78.20
IUUC-Pan-092860	Papio anubis	26.04	4.00e-16	77.80
IUUC-Psi-093622	Pelodiscus sinensis	20.00	1.00e-12	66.20
IUUC-Pma-094103	Petromyzon marinus	24.41	1.00e-12	66.20
IUUC-Pno-095144	Phaeosphaeria nodorum	19.48	7.00e-11	60.50
IUUC-Ppa-095269	Physcomitrella patens	43.67	4.00e-54	204.00
IUUC-Pfo-096929	Poecilia formosa	23.46	5.00e-19	87.00
IUUC-Pab-098338	Pongo abelii	25.60	4.00e-10	57.80
IUUC-Pop-099934	Populus trichocarpa	55.02	3.00e-84	304.00
IUUC-Pca-100836	Procavia capensis	25.97	1.00e-05	42.70
IUUC-Ppe-102017	Prunus persica	60.25	7.00e-102	362.00
IUUC-Pva-102220	Pteropus vampyrus	21.49	1.00e-12	65.90
IUUC-Pgr-103577	Puccinia graminis	26.15	2.00e-15	75.50
IUUC-Ptt-103924	Puccinia triticina	26.24	3.00e-13	67.80
IUUC-Pte-104393	Pyrenophora teres	23.97	9.00e-11	60.50
IUUC-Pyt-104539	Pyrenophora triticirepentis	23.31	3.00e-11	61.60
IUUC-Rno-105065	Rattus norvegicus	26.42	9.00e-16	76.60
IUUC-Sce-106408	Saccharomyces cerevisiae	25.35	1.00e-03	37.00
IUUC-Sha-107648	Sarcophilus harrisii	22.89	9.00e-16	76.60
IUUC-Sja-107856	Schizosaccharomyces japonicus	27.69	7.00e-15	73.20
IUUC-Spo-108064	Schizosaccharomyces pombe	24.90	6.00e-09	53.50
IUUC-Ssl-108419	Sclerotinia sclerotiorum	24.23	1.00e-15	76.60
IUUC-Smo-109269	Selaginella moellendorffii	41.52	4.00e-43	167.00
IUUC-Sit-110804	Setaria italica	50.65	1.00e-88	318.00
IUUC-Sly-111075	Solanum lycopersicum	56.33	4.00e-92	330.00
IUUC-Stu-112619	Solanum tuberosum	58.09	7.00e-97	346.00
IUUC-Sbi-114444	Sorghum bicolor	51.93	9.00e-76	276.00
IUUC-Sre-115122	Sporisorium reilianum	22.64	1.00e-09	56.60
IUUC-Tgu-117379	Taeniopygia guttata	22.89	5.00e-12	63.90
IUUC-Tru-118342	Takifugu rubripes	21.49	1.00e-18	86.30
IUUC-Tsy-119378	Tarsius syrichta	24.55	1.00e-05	41.60
IUUC-Tni-120275	Tetraodon nigroviridis	22.73	1.00e-18	85.90
IUUC-Tca-121152	Theobroma cacao	66.94	2.00e-90	324.00
IUUC-Tre-121956	Trichoderma reesei	23.08	1.00e-11	63.20
IUUC-Tvi-122418	Trichoderma virens	22.90	1.00e-11	63.20
IUUC-Tae-123908	Triticum aestivum	52.65	8.00e-85	306.00
IUUC-Tur-126685	Triticum urartu	50.53	4.00e-79	287.00
IUUC-Tme-126983	Tuber melanosporum	21.40	5.00e-11	61.20
IUUC-Tbe-127855	Tupaia belangeri	25.00	2.00e-09	54.70
IUUC-Ttr-129282	Tursiops truncatus	24.21	5.00e-15	73.90
IUUC-Uma-129501	Ustilago maydis	28.12	5.00e-15	74.70
IUUC-Vda-129809	Verticillium dahliae	21.46	4.00e-13	67.80
IUUC-Vvi-131264	Vitis vinifera	58.10	1.00e-97	348.00
IUUC-Xtr-131816	Xenopus tropicalis	23.08	2.00e-13	68.60
IUUC-Xma-134145	Xiphophorus maculatus	21.07	5.00e-17	80.50
IUUC-Zma-134965	Zea mays	54.31	1.00e-90	325.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence