iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007203

UUCD1 version

Ensembl Protein ID

UniProt Accession

Q8RWQ8; B9DFR4; Q9STV5; FBX14_ARATH

Genbank Protein ID

CAB45074.1; CAB79349.1; AEE84897.1; AEE84898.1; AAM10320.1; AAP21148.1; BAH19581.1

Protein Name

F-box protein FBX14; Transport inhibitor response 1-like protein

Genbank Nucleotide ID

AL078637; AL161561; CP002687; CP002687; AY091772; BT006340; AK316873

Gene Name

FBX14; At4g24390; T22A6.220

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G24390	AT4G24390.1	AT4G24390.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndex	PINA	HINT	Mentha
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box	F-box	16920877

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MTEEDSSAKM SEDVEKYLNL NPPCSSSSSS SSAATFTNKS RNFKSSPPPC PDHVLENVLE 60
NVLQFLTSRC DRNAVSLVCR SWYRVEAQTR LEVFIGNCYS LSPARLIHRF KRVRSLVLKG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAAATACTT GATGATTCTT TTTATTTCTT CATCAACAAA AATAATGTGC AAAACCAAAA 60
ATATTTGTTT TTTTTTCTTT TACATAGTCT CCTAAATAAT GGAGGTGAAA ATGGAGAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

SMART

SM00367--LRR_CC

Gene Ontology

GO:0005634--C:nucleus
GO:0019005--C:SCF ubiquitin ligase complex
GO:0010011--F:auxin binding
GO:0000822--F:inositol hexakisphosphate binding
GO:0009734--P:auxin-activated signaling pathway
GO:0016567--P:protein ubiquitination

KEGG

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005507	Arabidopsis lyrata	92.83	0.00e+00	1116.00
IUUC-Bra-017595	Brassica rapa	80.67	0.00e+00	1006.00
IUUC-Hvu-047338	Hordeum vulgare	63.46	0.00e+00	753.00
IUUC-Kpa-049357	Komagataella pastoris	25.21	5.90e-02	33.10
IUUC-Lpe-051042	Leersia perrieri	62.95	0.00e+00	738.00
IUUC-Oba-075211	Oryza barthii	55.14	0.00e+00	642.00
IUUC-Obr-076665	Oryza brachyantha	64.12	0.00e+00	741.00
IUUC-Ogl-077786	Oryza glaberrima	63.95	0.00e+00	740.00
IUUC-Ogu-078876	Oryza glumaepatula	63.78	0.00e+00	735.00
IUUC-Oin-080178	Oryza indica	64.04	0.00e+00	731.00
IUUC-Olo-080421	Oryza longistaminata	54.97	0.00e+00	640.00
IUUC-Ome-081394	Oryza meridionalis	64.30	0.00e+00	742.00
IUUC-Oni-082189	Oryza nivara	64.30	0.00e+00	741.00
IUUC-Opu-083772	Oryza punctata	64.47	0.00e+00	744.00
IUUC-Oru-084414	Oryza rufipogon	64.30	0.00e+00	741.00
IUUC-Osa-085414	Oryza sativa	64.30	0.00e+00	743.00
IUUC-Sit-110096	Setaria italica	64.47	0.00e+00	746.00
IUUC-Sbi-114235	Sorghum bicolor	64.47	0.00e+00	748.00
IUUC-Tae-123328	Triticum aestivum	63.37	0.00e+00	736.00
IUUC-Tur-126251	Triticum urartu	63.46	8.00e-176	609.00

Created Date

25-Jun-2017