iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075225

Ensembl Protein ID

OBART12G08480.1

UniProt Accession

A0A0D3HT96; A0A0D3HT96_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART12G08480	OBART12G08480.1	OBART12G08480.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.20e-26	92.7	21	97

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++e flCp+s+++MrdPv+++sG t++r++I kw++++g+      cPvt+++l++++l P+++lr++i++w+++n+
   Q: 21   IYESFLCPLSKQVMRDPVTIESGATFEREAILKWFKDNGSggrrlVCPVTNKELSSTELNPSIALRNTIDEWMHRNE 97
           799********************************888888899******************************997 PP

Organism

Oryza barthii

Protein Sequence
(Fasta)

MAEGQDGYFD SSTDSLRVEP IYESFLCPLS KQVMRDPVTI ESGATFEREA ILKWFKDNGS 60
GGRRLVCPVT NKELSSTELN PSIALRNTID EWMHRNEAAK LDVARKSLTS DCSEGDILQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGAAG GTCAGGATGG TTATTTTGAC TCATCCACTG ACAGCTTGCG TGTTGAGCCT 60
ATTTATGAAT CATTCTTGTG TCCTCTCTCT AAACAAGTTA TGCGGGATCC TGTCACTATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000143	Aegilops tauschii	87.59	0.00e+00	1404.00
IUUC-Atr-002916	Amborella trichopoda	61.18	0.00e+00	935.00
IUUC-Aly-006004	Arabidopsis lyrata	59.90	0.00e+00	843.00
IUUC-Ath-007153	Arabidopsis thaliana	59.19	0.00e+00	833.00
IUUC-Bdi-014487	Brachypodium distachyon	86.46	0.00e+00	1390.00
IUUC-Bol-015955	Brassica oleracea	58.38	0.00e+00	798.00
IUUC-Bra-017058	Brassica rapa	58.68	0.00e+00	810.00
IUUC-Gma-043617	Glycine max	67.55	0.00e+00	1048.00
IUUC-Hvu-047783	Hordeum vulgare	87.84	0.00e+00	1412.00
IUUC-Lpe-050971	Leersia perrieri	94.17	0.00e+00	1456.00
IUUC-Mtr-058511	Medicago truncatula	65.93	0.00e+00	1034.00
IUUC-Mac-064911	Musa acuminata	64.98	0.00e+00	987.00
IUUC-Obr-076103	Oryza brachyantha	95.79	0.00e+00	1482.00
IUUC-Ogl-077529	Oryza glaberrima	99.88	0.00e+00	1590.00
IUUC-Ogu-078735	Oryza glumaepatula	99.75	0.00e+00	1588.00
IUUC-Oin-079422	Oryza indica	99.63	0.00e+00	1563.00
IUUC-Olo-080644	Oryza longistaminata	98.47	0.00e+00	750.00
IUUC-Ome-081455	Oryza meridionalis	98.88	0.00e+00	1577.00
IUUC-Oni-082690	Oryza nivara	99.50	0.00e+00	1563.00
IUUC-Opu-083157	Oryza punctata	98.14	0.00e+00	1564.00
IUUC-Oru-085058	Oryza rufipogon	99.63	0.00e+00	1563.00
IUUC-Osa-086000	Oryza sativa	99.63	0.00e+00	1563.00
IUUC-Ppa-096021	Physcomitrella patens	49.24	0.00e+00	716.00
IUUC-Pop-099966	Populus trichocarpa	65.44	0.00e+00	1027.00
IUUC-Ppe-101973	Prunus persica	64.70	0.00e+00	1018.00
IUUC-Ssl-108555	Sclerotinia sclerotiorum	32.14	2.00e-03	36.20
IUUC-Smo-109219	Selaginella moellendorffii	47.01	0.00e+00	656.00
IUUC-Sit-110490	Setaria italica	87.64	0.00e+00	1377.00
IUUC-Sly-111702	Solanum lycopersicum	66.06	0.00e+00	967.00
IUUC-Stu-111962	Solanum tuberosum	64.94	0.00e+00	1019.00
IUUC-Tca-121113	Theobroma cacao	66.54	0.00e+00	1051.00
IUUC-Tur-126573	Triticum urartu	87.22	0.00e+00	1405.00
IUUC-Vvi-131623	Vitis vinifera	66.42	0.00e+00	1073.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence