iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113929

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G027600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g002420	Sb08g002420.1	Sb08g002420.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.60e-07	30.4	138	180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C +  +dg  ++ lp C H+fha C+  w       + +++CP Cr
   Q: 138  CAVCINVVRDGeaVRRLPaCAHTFHAPCIDGW------LRAHATCPMCR 180
           ******996666699999**************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDDGEAVRRG NGAWEIVLQV RPDPTTAWSD RYVKLFLLWS AAIAVSVAIY VFTGYVWGSV 60
ATAAFLVAGC WITCCCYLKA APPEPPLLPV DAAIVGPLRV AVPAVNCGGS SASGLSQAEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCACCATTAG CCACCGCTGG AAGTGTAACA CAGATAAGCT AGCGGCTCCA CGGCGGCCTC 60
CATGGACGAC GGCGAAGCAG TTCGCCGCGG GAACGGCGCG TGGGAGATCG TCCTGCAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_08g002420

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-050897	Leersia perrieri	49.72	8.00e-27	112.00
IUUC-Oba-075859	Oryza barthii	48.97	5.00e-24	103.00
IUUC-Ogl-077863	Oryza glaberrima	48.97	5.00e-24	103.00
IUUC-Ogu-078094	Oryza glumaepatula	50.82	4.00e-23	99.80
IUUC-Oin-079999	Oryza indica	47.85	7.00e-28	115.00
IUUC-Oni-082234	Oryza nivara	50.28	1.00e-27	114.00
IUUC-Opu-083631	Oryza punctata	62.50	3.00e-26	110.00
IUUC-Oru-084196	Oryza rufipogon	50.28	1.00e-27	114.00
IUUC-Osa-085467	Oryza sativa	50.28	1.00e-27	114.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence