iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xma-133852

Ensembl Protein ID

ENSXMAP00000010032.1

UniProt Accession

M4A6D8; M4A6D8_XIPMA

Genbank Protein ID

ENSXMAP00000010032

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGAJ01027409

Gene Name

RNF38 (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXMAG00000010008.1	ENSXMAT00000010046.1	ENSXMAP00000010032.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.70e-08	33.5	412	453

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C++df+    ++vlpC H fh +C+ kw       + + +CP+Cr
   Q: 412  CVVCMSDFESRqlLRVLPCSHEFHGKCVDKW------LRANRTCPICR 453
           ********4434599****************......**********8 PP

Organism

Xiphophorus maculatus

Protein Sequence
(Fasta)

MEDSPSPKRQ RLSQQSMLDL GSAPPSTPSS PIRPWELPPS RRPHPHYMPE RCHTPVRNRR 60
SPPMRRQRGR RDRLTRHHHH YNSNNNHHHH HRYHPPNPSP RPLHQSPNLS PRLLHPGAHP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACCCCC CCAGGACTCG GTCGCGGTCT CGATCTGGCT TCTATCATTT CTCCATGAAC 60
GGCAGCGTTG GAGGCAACGA CGGGGGCTTG ATGAACGCCA GCGGAGGAGG GGTGAGCTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cre-022984	Chlamydomonas reinhardtii	33.63	4.00e-13	71.20
IUUC-Gmo-039153	Gadus morhua	88.67	7.00e-137	480.00
IUUC-Gac-041884	Gasterosteus aculeatus	88.86	2.00e-130	459.00
IUUC-Mla-058928	Melampsora laricipopulina	40.91	4.00e-10	58.20
IUUC-Ont-072311	Oreochromis niloticus	92.05	3.00e-136	478.00
IUUC-Oba-075859	Oryza barthii	37.80	8.00e-11	60.10
IUUC-Ogu-078094	Oryza glumaepatula	39.74	1.00e-10	59.30
IUUC-Olo-080723	Oryza longistaminata	25.45	6.00e-15	75.90
IUUC-Oni-082234	Oryza nivara	41.03	1.00e-14	72.80
IUUC-Oru-084196	Oryza rufipogon	41.03	1.00e-14	72.80
IUUC-Osa-085467	Oryza sativa	41.03	1.00e-14	72.80
IUUC-Ola-087425	Oryzias latipes	90.46	2.00e-158	552.00
IUUC-Pfo-097300	Poecilia formosa	92.10	6.00e-144	504.00
IUUC-Pgr-103421	Puccinia graminis	41.51	1.00e-09	55.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence