iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114123

UUCD1 version

UUC-SoB-00615

Ensembl Protein ID

Sb03g003380.1

UniProt Accession

A0A1B6Q163; A0A1B6Q163_SORBI

Genbank Protein ID

KXG31658.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G037700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g003380	Sb03g003380.1	Sb03g003380.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-21	76.3	249	272

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 8    claf..sdtllvsGsdDgtikvWDl 30
           ++a+  s  llvs+s D ++kvWD+
   Q: 249  SVAWhkS-SLLVSCSKDSKVKVWDT 272
           799*853.89**************6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSAPPVRTLA DLDGDVLAHC AGYLGARDVA SLSMCCRPLR AAAYCDAVWY RLFRDQWPFE 60
KVPCDALGIR ELYIHRHTDI HQMKFGDPVS VLYYLDSAET TPSHLMLDRN SIWFCQGPAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCCAAAGC CGCTCGAGCC TTCGCCGCGC CGCCTGGAAC TGTGGCCATC GGCCCACCGC 60
TGTACAGGCC TCGTCTTCTC CGCCGGCGAT GTCGGCGCCG CCTGTGCGGA CGCTCGCCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003129	Amborella trichopoda	44.33	1.00e-95	342.00
IUUC-Bdi-014621	Brachypodium distachyon	73.65	0.00e+00	672.00
IUUC-Gma-043867	Glycine max	42.06	4.00e-99	354.00
IUUC-Hvu-047817	Hordeum vulgare	73.28	0.00e+00	703.00
IUUC-Lpe-051161	Leersia perrieri	73.86	0.00e+00	685.00
IUUC-Mtr-057899	Medicago truncatula	48.40	1.00e-72	265.00
IUUC-Mac-065373	Musa acuminata	52.64	6.00e-106	376.00
IUUC-Oba-075705	Oryza barthii	73.74	0.00e+00	705.00
IUUC-Obr-076913	Oryza brachyantha	74.89	0.00e+00	715.00
IUUC-Ogl-077871	Oryza glaberrima	73.95	0.00e+00	706.00
IUUC-Ogu-078128	Oryza glumaepatula	74.37	0.00e+00	710.00
IUUC-Oin-079947	Oryza indica	74.16	0.00e+00	707.00
IUUC-Olo-080246	Oryza longistaminata	71.79	3.00e-159	553.00
IUUC-Ome-081308	Oryza meridionalis	73.79	0.00e+00	709.00
IUUC-Oni-082542	Oryza nivara	74.16	0.00e+00	708.00
IUUC-Opu-083600	Oryza punctata	74.37	0.00e+00	697.00
IUUC-Oru-084880	Oryza rufipogon	74.37	0.00e+00	709.00
IUUC-Osa-085335	Oryza sativa	74.22	5.00e-161	559.00
IUUC-Ppa-095334	Physcomitrella patens	35.98	1.00e-66	246.00
IUUC-Pop-099428	Populus trichocarpa	49.14	1.00e-79	288.00
IUUC-Ppe-101795	Prunus persica	47.27	7.00e-87	313.00
IUUC-Smo-108689	Selaginella moellendorffii	33.75	6.00e-51	194.00
IUUC-Sit-110574	Setaria italica	83.37	0.00e+00	742.00
IUUC-Sly-111776	Solanum lycopersicum	40.57	5.00e-87	313.00
IUUC-Stu-112081	Solanum tuberosum	44.56	5.00e-54	203.00
IUUC-Tca-120973	Theobroma cacao	44.12	2.00e-111	394.00
IUUC-Tae-125393	Triticum aestivum	73.90	0.00e+00	690.00
IUUC-Vvi-131356	Vitis vinifera	45.51	2.00e-112	398.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence