iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078873

Ensembl Protein ID

OGLUM01G09350.1

UniProt Accession

A0A0D9Y5L0; A0A0D9Y5L0_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM01G09350	OGLUM01G09350.1	OGLUM01G09350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.90e-26	92.0	275	347
E3 adaptor/Cullin RING/DCX/DWD	7.00e-14	52.5	999	1031

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceens 73
           +p++f+CpI+ +++ dPv+l++G+ty+r++I++wl++g+ tcP+tr++l+   l   n++l+rli aw+++n 
   Q: 275  TPKDFVCPITSQVFDDPVTLETGQTYERRAIQEWLDRGNATCPITRHRLHGAHLpSTNYVLKRLIAAWRDQNP 347
           699***************************************************9***************996 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           Ht  +t+la   s+  l sGs D ti+vW lr+
   Q: 999  HTKAITSLAVlhSEEKLFSGSLDRTIRVWQLRD 1031
           9999*****7777799*************9987 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MRHFAARRAS TAAAAAEAAS QRGEDGSVET SAMSAMRVLS LMSGAQAQEM RDLEREYEKV 60
LDTNCIAYAL YLKKILEAGD AAKETYSPPP PPPELVFGVG DDDQDGDVDD ETTAETDEAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGCCACT TCGCCGCGCG CCGCGCGTCC ACCGCCGCCG CCGCGGCGGA GGCGGCGTCC 60
CAGCGCGGCG AGGACGGGTC CGTGGAGACC TCCGCGATGT CGGCGATGAG GGTTCTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000289	Aegilops tauschii	77.57	0.00e+00	1399.00
IUUC-Atr-002936	Amborella trichopoda	48.82	0.00e+00	762.00
IUUC-Bdi-014680	Brachypodium distachyon	72.12	0.00e+00	1553.00
IUUC-Gma-044085	Glycine max	50.00	0.00e+00	911.00
IUUC-Hvu-047711	Hordeum vulgare	76.25	4.00e-166	576.00
IUUC-Lpe-051224	Leersia perrieri	77.17	0.00e+00	1491.00
IUUC-Mtr-058452	Medicago truncatula	45.58	0.00e+00	910.00
IUUC-Mac-064685	Musa acuminata	57.99	0.00e+00	1049.00
IUUC-Obr-076347	Oryza brachyantha	77.70	0.00e+00	1616.00
IUUC-Ogl-077695	Oryza glaberrima	98.71	0.00e+00	1900.00
IUUC-Oin-079745	Oryza indica	99.47	0.00e+00	899.00
IUUC-Olo-081050	Oryza longistaminata	86.74	0.00e+00	818.00
IUUC-Ome-081604	Oryza meridionalis	94.76	0.00e+00	1831.00
IUUC-Oni-082155	Oryza nivara	97.34	0.00e+00	1870.00
IUUC-Opu-083775	Oryza punctata	83.39	0.00e+00	1520.00
IUUC-Oru-084628	Oryza rufipogon	93.96	0.00e+00	1853.00
IUUC-Osa-086224	Oryza sativa	99.47	6.00e-178	616.00
IUUC-Pop-099122	Populus trichocarpa	50.06	0.00e+00	755.00
IUUC-Ppe-101249	Prunus persica	53.48	0.00e+00	874.00
IUUC-Smo-109545	Selaginella moellendorffii	35.42	8.00e-131	461.00
IUUC-Sit-110152	Setaria italica	77.23	0.00e+00	1374.00
IUUC-Sly-111208	Solanum lycopersicum	37.61	0.00e+00	635.00
IUUC-Stu-111946	Solanum tuberosum	44.57	0.00e+00	941.00
IUUC-Sbi-114464	Sorghum bicolor	70.89	0.00e+00	1506.00
IUUC-Tca-121369	Theobroma cacao	53.35	0.00e+00	957.00
IUUC-Tae-123295	Triticum aestivum	74.36	0.00e+00	1622.00
IUUC-Tur-126163	Triticum urartu	77.43	0.00e+00	1140.00
IUUC-Vvi-131144	Vitis vinifera	55.38	0.00e+00	1000.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence