iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121789

Ensembl Protein ID

EOX95671

UniProt Accession

A0A061DUG0; A0A061DUG0_THECC

Genbank Protein ID

EOX95671.1

Protein Name

Transducin family protein / WD-40 repeat family protein, putative isoform 1

Genbank Nucleotide ID

CM001879

Gene Name

TCM_005121

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_005121	EOX95671	EOX95671
TCM_005121	EOX95672	EOX95672

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.70e-14	52.1	2230	2262

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H +s+t ++  ++  l+++Gs Dg +k+WD + 
   Q: 2230 HLGSITKISTiPNtSLFLTGSKDGDVKLWDAKA 2262
           9999****96666599**************665 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MIQWRPSGGK QLSRDAKHLR RHILLTCCLD GTVRLWSEVD NGRVKKPGKD GIYDHKITIR 60
SFCVAAVIEI DCALRGTLGV DIFLKWATEI GGIVKTGEET KKYFCTEGDK REVGRCEWLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCTTTTTG TTGGAGCCAG AATGTAGAAC TTCTACAATG TACAAAAGTT GAGGCAGTTG 60
AATGGACGGC CTCCGGGGAT GGGATATTAG CCGGTGGATT AGAGGTTATT TTATGGAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12234--Rav1p_C
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000362	Aegilops tauschii	54.26	8.00e-52	194.00
IUUC-Aml-001368	Ailuropoda melanoleuca	30.45	1.00e-36	149.00
IUUC-Atr-002754	Amborella trichopoda	65.44	0.00e+00	720.00
IUUC-Apl-003377	Anas platyrhynchos	32.65	2.00e-34	142.00
IUUC-Aca-004649	Anolis carolinensis	32.29	4.00e-37	151.00
IUUC-Aly-006404	Arabidopsis lyrata	48.95	0.00e+00	1975.00
IUUC-Ath-006612	Arabidopsis thaliana	49.81	0.00e+00	2016.00
IUUC-Afu-009077	Aspergillus fumigatus	27.12	3.00e-35	143.00
IUUC-Ani-009437	Aspergillus nidulans	26.92	6.00e-37	149.00
IUUC-Ang-009742	Aspergillus niger	27.75	8.00e-37	149.00
IUUC-Ame-010919	Astyanax mexicanus	31.01	3.00e-35	144.00
IUUC-Bta-013088	Bos taurus	31.31	2.00e-37	152.00
IUUC-Bdi-014471	Brachypodium distachyon	49.15	0.00e+00	657.00
IUUC-Bol-016375	Brassica oleracea	48.46	0.00e+00	1923.00
IUUC-Bra-016630	Brassica rapa	48.56	0.00e+00	1944.00
IUUC-Cel-018537	Caenorhabditis elegans	27.90	3.00e-27	118.00
IUUC-Cja-019137	Callithrix jacchus	35.78	5.00e-36	147.00
IUUC-Cfa-021215	Canis familiaris	30.67	1.00e-36	149.00
IUUC-Cpo-022333	Cavia porcellus	30.99	2.00e-37	152.00
IUUC-Csa-023151	Chlorocebus sabaeus	35.04	8.00e-36	146.00
IUUC-Cho-024762	Choloepus hoffmanni	33.61	3.00e-33	138.00
IUUC-Csv-026055	Ciona savignyi	39.66	4.00e-38	154.00
IUUC-Dre-028673	Danio rerio	35.12	4.00e-35	144.00
IUUC-Dno-029601	Dasypus novemcinctus	28.48	6.00e-27	117.00
IUUC-Dor-030381	Dipodomys ordii	35.47	3.00e-36	147.00
IUUC-Dme-031825	Drosophila melanogaster	36.84	2.00e-39	159.00
IUUC-Ete-033176	Echinops telfairi	33.89	1.00e-33	139.00
IUUC-Eca-033386	Equus caballus	34.02	4.00e-34	141.00
IUUC-Eeu-035011	Erinaceus europaeus	29.07	2.00e-34	142.00
IUUC-Fca-035735	Felis catus	31.11	2.00e-37	152.00
IUUC-Fal-037367	Ficedula albicollis	35.12	7.00e-35	143.00
IUUC-Gmo-038687	Gadus morhua	31.21	4.00e-36	147.00
IUUC-Gga-040693	Gallus gallus	32.09	1.00e-35	145.00
IUUC-Gac-041986	Gasterosteus aculeatus	31.65	9.00e-35	143.00
IUUC-Gma-044099	Glycine max	53.60	0.00e+00	2353.00
IUUC-Ggo-044811	Gorilla gorilla	34.62	2.00e-35	145.00
IUUC-Hsa-045950	Homo sapiens	34.62	2.00e-35	145.00
IUUC-Hvu-047213	Hordeum vulgare	66.03	6.00e-120	422.00
IUUC-Itr-047982	Ictidomys tridecemlineatus	34.02	5.00e-34	140.00
IUUC-Lch-049469	Latimeria chalumnae	34.94	1.00e-35	146.00
IUUC-Lpe-051382	Leersia perrieri	42.04	0.00e+00	1390.00
IUUC-Loc-052909	Lepisosteus oculatus	32.81	6.00e-39	157.00
IUUC-Laf-054195	Loxodonta africana	35.04	2.00e-36	149.00
IUUC-Mcc-055646	Macaca mulatta	34.62	2.00e-35	145.00
IUUC-Meu-056627	Macropus eugenii	32.04	3.00e-22	101.00
IUUC-Mtr-058725	Medicago truncatula	53.10	0.00e+00	2338.00
IUUC-Mga-059386	Meleagris gallopavo	33.20	1.00e-33	139.00
IUUC-Mmr-060784	Microcebus murinus	35.04	5.00e-36	147.00
IUUC-Mdo-062914	Monodelphis domestica	31.75	4.00e-35	144.00
IUUC-Mmu-063808	Mus musculus	31.83	3.00e-39	158.00
IUUC-Mac-065224	Musa acuminata	51.38	0.00e+00	1332.00
IUUC-Mpu-066054	Mustela putorius furo	34.02	4.00e-34	141.00
IUUC-Mlu-067458	Myotis lucifugus	31.21	1.00e-36	149.00
IUUC-Nfi-068420	Neosartorya fischeri	26.63	3.00e-34	140.00
IUUC-Nle-070123	Nomascus leucogenys	34.62	2.00e-35	145.00
IUUC-Opr-070543	Ochotona princeps	24.23	1.00e-18	89.70
IUUC-Ont-071658	Oreochromis niloticus	32.50	3.00e-35	144.00
IUUC-Ocu-074048	Oryctolagus cuniculus	31.65	6.00e-37	150.00
IUUC-Oba-075826	Oryza barthii	41.54	0.00e+00	1565.00
IUUC-Obr-076145	Oryza brachyantha	41.62	0.00e+00	1547.00
IUUC-Ogu-078307	Oryza glumaepatula	41.74	0.00e+00	1600.00
IUUC-Oin-080118	Oryza indica	39.09	0.00e+00	879.00
IUUC-Olo-080848	Oryza longistaminata	53.99	0.00e+00	640.00
IUUC-Oni-082792	Oryza nivara	42.90	0.00e+00	1323.00
IUUC-Opu-084153	Oryza punctata	41.81	0.00e+00	1357.00
IUUC-Oru-084415	Oryza rufipogon	42.35	0.00e+00	1290.00
IUUC-Osa-085332	Oryza sativa	56.45	0.00e+00	665.00
IUUC-Ola-087560	Oryzias latipes	30.82	2.00e-33	139.00
IUUC-Oga-088816	Otolemur garnettii	31.63	6.00e-39	157.00
IUUC-Oar-089618	Ovis aries	30.99	3.00e-37	151.00
IUUC-Ptr-090937	Pan troglodytes	34.62	2.00e-35	145.00
IUUC-Pan-092151	Papio anubis	34.62	2.00e-35	145.00
IUUC-Psi-093590	Pelodiscus sinensis	31.46	5.00e-36	147.00
IUUC-Ppa-095505	Physcomitrella patens	44.75	5.00e-116	412.00
IUUC-Pfo-097445	Poecilia formosa	30.32	2.00e-36	149.00
IUUC-Pab-098237	Pongo abelii	34.62	1.00e-35	145.00
IUUC-Pop-098812	Populus trichocarpa	61.62	0.00e+00	1818.00
IUUC-Pca-101008	Procavia capensis	35.04	6.00e-36	147.00
IUUC-Ppe-101610	Prunus persica	61.44	0.00e+00	2690.00
IUUC-Pva-102348	Pteropus vampyrus	34.76	2.00e-35	145.00
IUUC-Rno-105076	Rattus norvegicus	32.15	2.00e-39	158.00
IUUC-Sha-106860	Sarcophilus harrisii	36.02	5.00e-35	144.00
IUUC-Sja-107657	Schizosaccharomyces japonicus	31.50	2.00e-27	117.00
IUUC-Smo-109444	Selaginella moellendorffii	52.52	5.00e-126	443.00
IUUC-Sit-109981	Setaria italica	44.29	0.00e+00	857.00
IUUC-Sly-110968	Solanum lycopersicum	48.71	0.00e+00	2060.00
IUUC-Stu-111939	Solanum tuberosum	72.97	2.00e-77	280.00
IUUC-Sar-113751	Sorex araneus	31.25	2.00e-21	99.40
IUUC-Sbi-113768	Sorghum bicolor	63.54	8.00e-68	248.00
IUUC-Ssc-116371	Sus scrofa	29.88	1.00e-36	149.00
IUUC-Tgu-117108	Taeniopygia guttata	34.71	5.00e-34	140.00
IUUC-Tru-117628	Takifugu rubripes	31.65	3.00e-35	144.00
IUUC-Tsy-118837	Tarsius syrichta	28.12	1.00e-32	136.00
IUUC-Tni-120709	Tetraodon nigroviridis	31.07	3.00e-35	145.00
IUUC-Tae-125726	Triticum aestivum	42.07	0.00e+00	1571.00
IUUC-Tur-126379	Triticum urartu	54.26	2.00e-53	200.00
IUUC-Tbe-127760	Tupaia belangeri	34.44	6.00e-35	144.00
IUUC-Ttr-128991	Tursiops truncatus	30.87	1.00e-37	152.00
IUUC-Vpa-130309	Vicugna pacos	30.99	2.00e-37	152.00
IUUC-Vvi-131584	Vitis vinifera	60.57	0.00e+00	1082.00
IUUC-Xtr-132638	Xenopus tropicalis	30.85	2.00e-34	142.00
IUUC-Xma-134109	Xiphophorus maculatus	30.62	2.00e-35	145.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence