iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-109866

Ensembl Protein ID

Si000245m

UniProt Accession

K3XEC8; K3XEC8_SETIT

Genbank Protein ID

KQL05798.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003532

Gene Name

LOC101780706; SETIT_000245mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si000245m.g	Si000245m	Si000245m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-21	75.6	656	682
UBD/Beta-Prp	3.40e-43	148.9	611	897

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWD 29
            +t+++f ++  +l+++s D+t++vWD
   Q: 656  LITDVRFsPSmSRLATSSFDKTVRVWD 682
           699*****66799************** PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgk.cvhtlkghedsvlslsfspsg 106
           + ++v++  +fs d++llatg+ d+++ +w +++ k  ++l++h+  +t+v+fsp+ + l+t+s D+t++vwd ++ +  ++t++gh++sv+sl+f+p++
   Q: 611  SSTKVVC-CHFSSDGKLLATGGHDKKVFLWCTEPLKSKSQLEEHSFLITDVRFSPSMSRLATSSFDKTVRVWDADNTDySLRTFTGHSASVMSLDFHPNK 709
           4455555.7899**************************************************************96662699****************88 PP
   S: 107  .dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtl.tgghtdsvyslsfdsngkelvsgsldgt 203
            d + s ++d  +r w +++g+cl  + ++ +g  + ++++p + ++l+++s  +t+ + d +t+   r   +g h++ ++sl +ds+g +l+s+s+d +
   Q: 710  eDMICSCDSDGEVRSWSINNGSCLT-CVKVFKGGATQMRFQPCKgKYLAAAS-EKTIYILDGETQHSCRSPlQG-HNKNIQSLCWDSTGDYLASVSED-S 805
           8***********************9.99999999999999998857766665.79999****887666665166.*********************99.6 PP
   S: 204  vklwdlq...tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwk 293
           v++w++     g+ v++ln+  + + s  f+p    l++ ++ +s+ +Wd+r +++++  + h+  + + a+ +    +++++s d  v++wk
   Q: 806  VRIWSFTpghDGDFVNELNCSGNKFHSCVFHPTYPSLLVIGCYESLELWDIREKNTMTLNNAHEGLIAALAA-CSATGKVASVSHDRFVKLWK 897
           9******99999***************************************************999999999.666777899999999*9997 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MSQTNWEADK MLDVYIYDYF MKRNLQATAK AFQAEGKVSS DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSDVAASYIE TQLMKAREQQ QQQPPQQRQQ QPQHIQMQQM LLQRAVHQQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCGCCGCTG CAGCCGCGAT TCAATCTGCT CTCCTCCCCC CTCCGCCGCT TACCGCTGCC 60
CCGCCGCCAC GCCGCTGCTA GGGTTTGGAC TCGGGGGCTC CCCGCCTCAG CGTCGCGCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

KEGG

sita:101780706

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000855	Aegilops tauschii	82.72	0.00e+00	1051.00
IUUC-Atr-002973	Amborella trichopoda	64.51	0.00e+00	727.00
IUUC-Aly-006446	Arabidopsis lyrata	59.29	0.00e+00	756.00
IUUC-Ath-006594	Arabidopsis thaliana	56.71	0.00e+00	737.00
IUUC-Bdi-015034	Brachypodium distachyon	83.92	0.00e+00	1107.00
IUUC-Bol-015720	Brassica oleracea	59.81	0.00e+00	740.00
IUUC-Bra-017481	Brassica rapa	59.12	0.00e+00	757.00
IUUC-Hvu-047773	Hordeum vulgare	89.10	0.00e+00	707.00
IUUC-Lpe-051536	Leersia perrieri	83.22	0.00e+00	1100.00
IUUC-Mtr-058613	Medicago truncatula	61.14	0.00e+00	757.00
IUUC-Mac-065234	Musa acuminata	63.47	0.00e+00	782.00
IUUC-Oba-075753	Oryza barthii	77.96	0.00e+00	887.00
IUUC-Obr-076415	Oryza brachyantha	84.82	0.00e+00	1077.00
IUUC-Ogl-077031	Oryza glaberrima	85.64	0.00e+00	1069.00
IUUC-Ogu-078070	Oryza glumaepatula	77.85	0.00e+00	889.00
IUUC-Oin-079642	Oryza indica	85.77	0.00e+00	1070.00
IUUC-Olo-080338	Oryza longistaminata	84.78	0.00e+00	957.00
IUUC-Ome-081901	Oryza meridionalis	85.09	0.00e+00	1044.00
IUUC-Oni-082450	Oryza nivara	77.85	0.00e+00	889.00
IUUC-Oru-085189	Oryza rufipogon	78.83	0.00e+00	935.00
IUUC-Osa-085738	Oryza sativa	85.64	0.00e+00	1069.00
IUUC-Pop-098994	Populus trichocarpa	63.27	0.00e+00	784.00
IUUC-Ppe-102018	Prunus persica	60.53	0.00e+00	761.00
IUUC-Smo-109607	Selaginella moellendorffii	50.92	0.00e+00	634.00
IUUC-Sly-110921	Solanum lycopersicum	62.19	0.00e+00	753.00
IUUC-Sbi-113848	Sorghum bicolor	92.01	0.00e+00	1123.00
IUUC-Tae-125267	Triticum aestivum	84.30	0.00e+00	1095.00
IUUC-Tur-126743	Triticum urartu	66.33	0.00e+00	843.00
IUUC-Vvi-131473	Vitis vinifera	62.76	0.00e+00	793.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence