iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-003045

Ensembl Protein ID

ERM93968

UniProt Accession

W1NEW6; W1NEW6_AMBTC

Genbank Protein ID

ERM93968.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI397522

Gene Name

AMTR_s00136p00031470

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00136p00031470	ERM93968	ERM93968

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.20e-28	95.6	295	325

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H+++ +c+++  +d +l+++Gs D++++++D
   Q: 295  HNADLHCVDWnpHDeNLILTGSADNSVRMFD 325
           999********9778***************9 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MKERVKAGQP SVDERYTQWK SLVPVLYDWL ANHNLVWPSL SCRWGPQLEQ ATYKNRQRLY 60
LSEQTDGSVP NTLVIANCEV VKPRVAAAEH ISQFNEEARS PFVKKFKTII HPGEVNRIRE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGGAGA GAGTGAAGGC AGGGCAGCCA TCGGTGGACG AGAGGTACAC ACAGTGGAAG 60
TCCCTCGTCC CTGTCCTTTA TGACTGGCTT GCCAACCATA ACCTTGTCTG GCCTTCTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

atr:18421864

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000914	Aegilops tauschii	75.50	0.00e+00	634.00
IUUC-Aly-006131	Arabidopsis lyrata	79.87	0.00e+00	778.00
IUUC-Ath-007494	Arabidopsis thaliana	79.66	0.00e+00	778.00
IUUC-Bdi-014938	Brachypodium distachyon	79.53	0.00e+00	722.00
IUUC-Bol-015567	Brassica oleracea	79.87	0.00e+00	763.00
IUUC-Bra-017112	Brassica rapa	79.49	0.00e+00	773.00
IUUC-Gma-044151	Glycine max	83.73	0.00e+00	795.00
IUUC-Hvu-047149	Hordeum vulgare	80.27	5.00e-53	198.00
IUUC-Lpe-051595	Leersia perrieri	71.07	4.00e-175	606.00
IUUC-Mtr-057993	Medicago truncatula	82.14	0.00e+00	780.00
IUUC-Mac-065523	Musa acuminata	81.48	0.00e+00	635.00
IUUC-Oba-075959	Oryza barthii	71.55	1.00e-177	614.00
IUUC-Obr-076021	Oryza brachyantha	76.99	0.00e+00	696.00
IUUC-Ogl-077211	Oryza glaberrima	77.62	0.00e+00	694.00
IUUC-Ogu-078314	Oryza glumaepatula	67.99	8.00e-163	565.00
IUUC-Oin-079269	Oryza indica	78.89	0.00e+00	701.00
IUUC-Olo-080631	Oryza longistaminata	67.12	1.00e-175	608.00
IUUC-Oni-082416	Oryza nivara	73.43	0.00e+00	639.00
IUUC-Opu-083571	Oryza punctata	67.62	3.00e-165	573.00
IUUC-Oru-084902	Oryza rufipogon	72.80	0.00e+00	625.00
IUUC-Osa-085579	Oryza sativa	78.89	0.00e+00	701.00
IUUC-Olu-087795	Ostreococcus lucimarinus	38.98	2.00e-79	288.00
IUUC-Ppa-095350	Physcomitrella patens	64.76	8.00e-173	598.00
IUUC-Pop-099098	Populus trichocarpa	83.12	0.00e+00	773.00
IUUC-Ppe-101724	Prunus persica	83.22	0.00e+00	771.00
IUUC-Sit-110597	Setaria italica	79.10	0.00e+00	708.00
IUUC-Sly-111411	Solanum lycopersicum	79.36	0.00e+00	724.00
IUUC-Stu-112285	Solanum tuberosum	79.44	1.00e-167	581.00
IUUC-Sbi-114341	Sorghum bicolor	78.25	0.00e+00	701.00
IUUC-Tca-121523	Theobroma cacao	82.13	0.00e+00	782.00
IUUC-Tae-125281	Triticum aestivum	76.49	0.00e+00	703.00
IUUC-Tur-126763	Triticum urartu	75.06	0.00e+00	626.00
IUUC-Vvi-131642	Vitis vinifera	81.88	0.00e+00	729.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence