iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126763

Ensembl Protein ID

TRIUR3_09596-P1

UniProt Accession

M7YH26; M7YH26_TRIUA

Genbank Protein ID

EMS49693.1

Protein Name

WD-40 repeat-containing protein MSI4

Genbank Nucleotide ID

KD240536

Gene Name

TRIUR3_09596

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_09596	TRIUR3_09596-T1	TRIUR3_09596-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-22	78.8	355	385

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H ++v+c+++  +d +++++Gs D+++++WD
   Q: 355  HGGDVHCVDWnlHDvNYILTGSADNSVRMWD 385
           99**********999**************** PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MKERGGSRAA VDERSVVVGV VFEQIHVGLG FCLTNVSRVL PPRTYLGFCS VTAQPVHAVS 60
PDLRVVSAWA AMSEHDLMIL LLEHRLCGAF LITTWWGPQF EQATYKNRQR LYLSEQTDGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGGAGA GAGGCGGGTC GAGGGCGGCG GTGGACGAGC GGTACGCGCA ATGGAAGTCG 60
CTCATCCCCG TCCTCTACGA CTGGTTCGCG AACCCCAACC CCGTCTGGCC AGCACTNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000914	Aegilops tauschii	92.46	0.00e+00	811.00
IUUC-Atr-003045	Amborella trichopoda	75.06	5.00e-180	622.00
IUUC-Aly-006131	Arabidopsis lyrata	74.60	0.00e+00	669.00
IUUC-Ath-007494	Arabidopsis thaliana	74.60	0.00e+00	671.00
IUUC-Bdi-014938	Brachypodium distachyon	78.15	0.00e+00	786.00
IUUC-Bol-015567	Brassica oleracea	73.91	0.00e+00	664.00
IUUC-Bra-017393	Brassica rapa	74.37	0.00e+00	669.00
IUUC-Cme-027213	Cyanidioschyzon merolae	30.66	5.00e-40	159.00
IUUC-Gma-042982	Glycine max	76.30	0.00e+00	678.00
IUUC-Hvu-047149	Hordeum vulgare	93.96	5.00e-70	254.00
IUUC-Lpe-051595	Leersia perrieri	82.35	0.00e+00	660.00
IUUC-Mtr-057993	Medicago truncatula	75.96	0.00e+00	673.00
IUUC-Mac-065523	Musa acuminata	74.35	1.00e-173	601.00
IUUC-Oba-075959	Oryza barthii	80.37	0.00e+00	672.00
IUUC-Obr-076021	Oryza brachyantha	76.69	0.00e+00	756.00
IUUC-Ogl-077211	Oryza glaberrima	86.99	0.00e+00	747.00
IUUC-Ogu-078314	Oryza glumaepatula	76.03	9.00e-179	618.00
IUUC-Oin-079269	Oryza indica	86.47	0.00e+00	741.00
IUUC-Olo-080631	Oryza longistaminata	74.84	0.00e+00	654.00
IUUC-Oni-082416	Oryza nivara	82.42	0.00e+00	697.00
IUUC-Opu-083571	Oryza punctata	78.55	0.00e+00	632.00
IUUC-Oru-084902	Oryza rufipogon	85.37	0.00e+00	691.00
IUUC-Osa-085579	Oryza sativa	86.47	0.00e+00	741.00
IUUC-Olu-087795	Ostreococcus lucimarinus	36.82	1.00e-66	246.00
IUUC-Ppa-095350	Physcomitrella patens	59.00	3.00e-151	527.00
IUUC-Pop-099098	Populus trichocarpa	73.88	0.00e+00	646.00
IUUC-Ppe-101724	Prunus persica	74.38	0.00e+00	657.00
IUUC-Sit-110597	Setaria italica	75.09	0.00e+00	715.00
IUUC-Sly-111411	Solanum lycopersicum	74.94	0.00e+00	640.00
IUUC-Stu-112285	Solanum tuberosum	76.97	3.00e-143	500.00
IUUC-Sbi-114341	Sorghum bicolor	73.96	0.00e+00	696.00
IUUC-Tca-121523	Theobroma cacao	75.45	0.00e+00	667.00
IUUC-Tae-125672	Triticum aestivum	85.12	0.00e+00	850.00
IUUC-Vvi-131642	Vitis vinifera	74.88	0.00e+00	634.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence