iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121482

Ensembl Protein ID

EOY17726

UniProt Accession

A0A061FKY9; A0A061FKY9_THECC

Genbank Protein ID

EOY17726.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001888

Gene Name

TCM_042472

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_042472	EOY17726	EOY17726

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.70e-08	34.4	111	153

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  f+dg  ++vlp C+H +h +C+ +w       s e +CPlCr
   Q: 111  CCICLGVFEDGekVKVLPaCQHSYHSECVDRW------LSAESSCPLCR 153
           ********77666999****************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MASSQDSQPF HWHYAELEDR DFQIRGRTLF FIIVLFSFVL VFTLIFVYSR WICSFHRDNS 60
STRSPTSHAP PQPRPEPRGL DPVTINALPI TMVTRGRKSA AAAAVALESE CCICLGVFED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCCCACTTC CCCAACTGTC CATATTAACT GCCAAACATG CCTTACCCTC CACTGGCGTG 60
AAACCTTCCT CTTTCTTCTT CCTAAATGGC TTCATCCCAA GACTCTCAGC CTTTCCACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002564	Amborella trichopoda	45.06	2.00e-25	107.00
IUUC-Aly-006564	Arabidopsis lyrata	48.45	4.00e-36	142.00
IUUC-Ath-007010	Arabidopsis thaliana	45.96	1.00e-22	97.80
IUUC-Bra-017408	Brassica rapa	40.62	8.00e-25	105.00
IUUC-Gma-043502	Glycine max	50.31	6.00e-43	165.00
IUUC-Mtr-058498	Medicago truncatula	50.61	3.00e-37	146.00
IUUC-Oba-075191	Oryza barthii	33.54	1.00e-19	88.60
IUUC-Ogl-077584	Oryza glaberrima	33.54	1.00e-19	88.60
IUUC-Ogu-078773	Oryza glumaepatula	33.54	1.00e-19	88.60
IUUC-Oin-080112	Oryza indica	34.39	2.00e-19	87.80
IUUC-Olo-080647	Oryza longistaminata	34.93	4.00e-17	80.10
IUUC-Ome-081611	Oryza meridionalis	33.79	2.00e-18	84.70
IUUC-Oni-082108	Oryza nivara	34.39	2.00e-19	87.40
IUUC-Opu-083607	Oryza punctata	36.63	6.00e-23	99.40
IUUC-Oru-084593	Oryza rufipogon	33.54	1.00e-19	88.60
IUUC-Osa-086279	Oryza sativa	33.54	1.00e-19	88.60
IUUC-Pop-099417	Populus trichocarpa	50.39	1.00e-32	130.00
IUUC-Ppe-101813	Prunus persica	52.20	2.00e-31	127.00
IUUC-Sit-110425	Setaria italica	37.43	4.00e-24	103.00
IUUC-Sly-110981	Solanum lycopersicum	51.59	6.00e-36	142.00
IUUC-Stu-112860	Solanum tuberosum	53.09	3.00e-38	149.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence