iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099678

Ensembl Protein ID

POPTR_0001s32370.1

UniProt Accession

A9P9K4; A9P9K4_POPTR

Genbank Protein ID

ABK93057.1; EEE84972.1

Protein Name

Ubiquitin-associated domain-containing family protein

Genbank Nucleotide ID

EF144845; CM000337

Gene Name

POPTRDRAFT_815638; POPTR_0001s32370g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s32370	POPTR_0001s32370.1	POPTR_0001s32370.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.30e-07	32.6	116	155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraa.nnnleaAveyLldg 41
           d+ +l++l++MGF++ +a +aL  + n +leaAv+++ ++
   Q: 116  DKKILDELEAMGFPTARATRALHYSgNASLEAAVNWVVEH 155
           8899********************************9876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAGVSLKCGD CGALLKSVQE AQDHAELTSH SNFSESTEAV LNLVCTTCGK PCRSKTESDL 60
HTKRTGHTEF ADKTAEVTKP ISLEVPKAAA MDIDVPAAAD ASTTSQPEEM VAPEVDKKIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACACTACAGA GCGGTACCAT CTCTCTCTCT CTCTCTCTGA TCGATTCACC GATCAATCAA 60
AATCGAAATC AATGGCGGGA GTGTCATTGA AGTGCGGGGA CTGTGGGGCC CTATTGAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR018997--PUB_domain
IPR015940--UBA
IPR009060--UBA-like
IPR013087--Znf_C2H2_type

PROSITE

PS50030--UBA
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF09409--PUB
PF00627--UBA

SMART

SM00580--PUG
SM00165--UBA

Gene Ontology

GO:0046872--F:metal ion binding

KEGG

pop:POPTR_0001s32370g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005639	Arabidopsis lyrata	81.53	3.00e-169	587.00
IUUC-Ath-006887	Arabidopsis thaliana	82.01	2.00e-163	567.00
IUUC-Bol-016537	Brassica oleracea	82.30	8.00e-171	592.00
IUUC-Bra-017510	Brassica rapa	82.10	1.00e-169	588.00
IUUC-Cme-027235	Cyanidioschyzon merolae	50.00	1.00e-09	57.00
IUUC-Gma-042684	Glycine max	79.62	1.00e-149	521.00
IUUC-Hvu-047779	Hordeum vulgare	77.02	7.00e-59	220.00
IUUC-Lpe-051322	Leersia perrieri	75.24	3.00e-143	501.00
IUUC-Mtr-058099	Medicago truncatula	77.11	2.00e-153	534.00
IUUC-Oba-075451	Oryza barthii	75.60	1.00e-141	495.00
IUUC-Obr-076923	Oryza brachyantha	75.68	2.00e-135	475.00
IUUC-Ogu-078589	Oryza glumaepatula	75.36	8.00e-142	496.00
IUUC-Oin-079151	Oryza indica	75.60	2.00e-142	498.00
IUUC-Olo-080934	Oryza longistaminata	68.27	1.00e-118	419.00
IUUC-Ome-081253	Oryza meridionalis	74.11	3.00e-140	490.00
IUUC-Opu-083336	Oryza punctata	75.12	1.00e-141	495.00
IUUC-Oru-085235	Oryza rufipogon	75.36	7.00e-142	496.00
IUUC-Osa-085611	Oryza sativa	75.36	7.00e-142	496.00
IUUC-Olu-087606	Ostreococcus lucimarinus	44.35	1.00e-25	110.00
IUUC-Ppa-095484	Physcomitrella patens	67.47	2.00e-127	448.00
IUUC-Ppe-101243	Prunus persica	81.45	6.00e-124	436.00
IUUC-Ssl-108458	Sclerotinia sclerotiorum	40.74	3.80e-01	29.30
IUUC-Sit-109874	Setaria italica	75.66	6.00e-140	489.00
IUUC-Sly-111766	Solanum lycopersicum	77.94	3.00e-157	547.00
IUUC-Stu-112122	Solanum tuberosum	77.51	8.00e-156	542.00
IUUC-Sbi-114220	Sorghum bicolor	75.96	3.00e-142	497.00
IUUC-Tca-121495	Theobroma cacao	85.30	4.00e-174	603.00
IUUC-Uma-129569	Ustilago maydis	47.22	2.00e-04	39.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence