iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112465

Ensembl Protein ID

PGSC0003DMT400070247

UniProt Accession

M1CLV4; M1CLV4_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400027313	PGSC0003DMT400070247	PGSC0003DMT400070247

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.70e-08	34.4	87	129

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl ++  +d +++lp CgH fha+C+  w       +++ +CP+Cr
   Q: 87   CIVCLAEYqkQDALRILPiCGHSFHATCIDIW------FQQHSTCPVCR 129
           ********77555*******************......**********8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MISSGTNLVM TVIGFAVSTM FIVFVCTRLI CARIQLNARR RSFAYASRSD LSILERGLHG 60
LEPLVVANFP TKKYGDVFFT SAEDAQCIVC LAEYQKQDAL RILPICGHSF HATCIDIWFQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTCTCTG TTTTCTCTCT CCACATGACA ATATCAAGAA AACATGCTGA CCCTCTTCTT 60
GATTAAAATG CTAAAATTTT CAAGATTCAA ATATCCAGTA AATATATATA TACATGCATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sot:102604126

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002798	Amborella trichopoda	67.82	2.00e-61	228.00
IUUC-Gma-044096	Glycine max	59.73	1.00e-74	271.00
IUUC-Lpe-051633	Leersia perrieri	47.55	1.00e-34	139.00
IUUC-Mtr-058009	Medicago truncatula	55.26	2.00e-65	240.00
IUUC-Mac-065561	Musa acuminata	70.78	1.00e-62	231.00
IUUC-Ogl-077876	Oryza glaberrima	44.58	5.00e-30	123.00
IUUC-Ogu-078546	Oryza glumaepatula	48.84	1.00e-31	129.00
IUUC-Opu-083702	Oryza punctata	49.26	6.00e-34	135.00
IUUC-Ppa-095233	Physcomitrella patens	40.16	6.00e-21	94.00
IUUC-Pop-099967	Populus trichocarpa	62.11	8.00e-71	258.00
IUUC-Ppe-101855	Prunus persica	64.89	3.00e-81	293.00
IUUC-Sly-110875	Solanum lycopersicum	95.52	3.00e-120	422.00
IUUC-Sbi-114099	Sorghum bicolor	50.88	5.00e-28	116.00
IUUC-Tca-121445	Theobroma cacao	65.07	2.00e-80	290.00
IUUC-Vvi-131455	Vitis vinifera	63.46	2.00e-73	266.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence