iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131056

UUCD1 version

UUC-ViV-01015

Ensembl Protein ID

VIT_04s0008g03690.t01

UniProt Accession

D7SUC9; D7SUC9_VITVI

Genbank Protein ID

CBI20878.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595231

Gene Name

PEX4; VIT_04s0008g03690

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_04s0008g03690	VIT_04s0008g03690.t01	VIT_04s0008g03690.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.90e-41	141.6	7	136

Active Site

Position(s)	Description	Evidence
90	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    Rlkkelkelekdpp..egisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyen.GkvClsi 85
           Rl ke+ke+++++   + i++ ++d+ ++++w +li Gp++tp+eggvF+l + +pe+YP++PP+v+fltkifhPnv+ + G++Cl+i
   Q: 7    RLFKEYKEVQREKAadPDIQLVCDDS-NIFKWTALIKGPSETPFEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKtGEICLDI 93
           899******98877446777777777.9**************************************************888******* PP
   S: 86   lkeeekWspalsvesvllsiqsllaepnpesplneeaaellkknr 130
           lk  ++Wspa++++sv+ +i++l+a+p+p+spln ++ +ll++ +
   Q: 94   LK--NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGD 136
           *9..********************************999988755 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MQASRARLFK EYKEVQREKA ADPDIQLVCD DSNIFKWTAL IKGPSETPFE GGVFQLAFAV 60
PEQYPLQPPQ VRFLTKIFHP NVHFKTGEIC LDILKNAWSP AWTLQSVCRA IIALMAHPEP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTTTGAGGC ATATTAGATT TGCCAAGCAG CAAACAAGAT GCAGGTTTGC TTCCTTTTTG 60
TCCTTTTTTA TTTCTTTCGC AGGGGGTGGG GGGTTTGGGG TTTTGTTTGT TTATGTAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding

KEGG

vvi:100254379

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000555	Aegilops tauschii	94.19	5.00e-88	315.00
IUUC-Atr-002740	Amborella trichopoda	94.90	1.00e-89	320.00
IUUC-Aly-006113	Arabidopsis lyrata	95.54	1.00e-89	320.00
IUUC-Ath-007486	Arabidopsis thaliana	93.63	1.00e-88	317.00
IUUC-Acl-008222	Aspergillus clavatus	40.00	5.00e-30	122.00
IUUC-Afl-008430	Aspergillus flavus	42.57	2.00e-32	130.00
IUUC-Afu-009088	Aspergillus fumigatus	40.79	4.00e-32	129.00
IUUC-Ani-009452	Aspergillus nidulans	43.05	2.00e-33	133.00
IUUC-Aor-010187	Aspergillus oryzae	42.57	2.00e-32	130.00
IUUC-Bdi-014648	Brachypodium distachyon	95.51	3.00e-89	319.00
IUUC-Bol-016138	Brassica oleracea	94.27	3.00e-88	315.00
IUUC-Bra-017259	Brassica rapa	94.81	2.00e-87	313.00
IUUC-Cre-022583	Chlamydomonas reinhardtii	69.59	1.00e-63	234.00
IUUC-Cgl-026528	Colletotrichum gloeosporioides	39.73	1.00e-29	121.00
IUUC-Cme-027300	Cyanidioschyzon merolae	60.16	1.00e-37	147.00
IUUC-Gma-043907	Glycine max	98.09	7.00e-92	328.00
IUUC-Kpa-049387	Komagataella pastoris	32.98	6.00e-29	119.00
IUUC-Lpe-051399	Leersia perrieri	96.69	2.00e-87	314.00
IUUC-Lma-053321	Leptosphaeria maculans	45.26	3.00e-31	126.00
IUUC-Mtr-058439	Medicago truncatula	96.18	3.00e-90	322.00
IUUC-Mvi-060238	Microbotryum violaceum	55.56	7.00e-39	151.00
IUUC-Mac-064623	Musa acuminata	94.90	4.00e-89	320.00
IUUC-Nfi-068258	Neosartorya fischeri	41.45	6.00e-33	132.00
IUUC-Oba-075919	Oryza barthii	96.13	3.00e-88	316.00
IUUC-Obr-076554	Oryza brachyantha	96.82	6.00e-91	325.00
IUUC-Ogu-078897	Oryza glumaepatula	96.58	7.00e-84	302.00
IUUC-Oni-082318	Oryza nivara	78.77	5.00e-79	286.00
IUUC-Opu-083715	Oryza punctata	96.71	4.00e-88	316.00
IUUC-Oru-084851	Oryza rufipogon	96.77	5.00e-89	319.00
IUUC-Osa-085417	Oryza sativa	96.82	6.00e-91	325.00
IUUC-Pno-095034	Phaeosphaeria nodorum	45.89	2.00e-28	117.00
IUUC-Ppa-095796	Physcomitrella patens	78.71	4.00e-74	268.00
IUUC-Pop-098843	Populus trichocarpa	96.82	1.00e-90	323.00
IUUC-Ppe-101953	Prunus persica	97.45	8.00e-91	324.00
IUUC-Pte-104310	Pyrenophora teres	50.86	5.00e-32	129.00
IUUC-Pyt-104497	Pyrenophora triticirepentis	45.83	1.00e-31	128.00
IUUC-Sce-106171	Saccharomyces cerevisiae	38.31	1.00e-28	118.00
IUUC-Sja-107788	Schizosaccharomyces japonicus	47.97	4.00e-37	146.00
IUUC-Spo-108341	Schizosaccharomyces pombe	47.10	3.00e-39	153.00
IUUC-Sit-110558	Setaria italica	96.82	6.00e-91	325.00
IUUC-Sly-111535	Solanum lycopersicum	96.18	2.00e-90	323.00
IUUC-Stu-112232	Solanum tuberosum	96.18	2.00e-90	323.00
IUUC-Sbi-113774	Sorghum bicolor	96.82	6.00e-91	325.00
IUUC-Sre-114982	Sporisorium reilianum	48.17	2.00e-43	167.00
IUUC-Tca-121736	Theobroma cacao	98.72	8.00e-92	327.00
IUUC-Tvi-122646	Trichoderma virens	37.50	3.00e-30	123.00
IUUC-Tae-124241	Triticum aestivum	94.87	6.00e-89	318.00
IUUC-Tur-126566	Triticum urartu	94.19	1.00e-87	315.00
IUUC-Tme-127194	Tuber melanosporum	39.86	2.00e-32	130.00
IUUC-Uma-129494	Ustilago maydis	48.80	3.00e-38	150.00
IUUC-Yli-134417	Yarrowia lipolytica	46.00	3.00e-40	156.00
IUUC-Zma-135372	Zea mays	96.82	6.00e-91	325.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence