iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002831

Ensembl Protein ID

ERN19403

UniProt Accession

U5DG49; U5DG49_AMBTC

Genbank Protein ID

ERN19403.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392069

Gene Name

AMTR_s00069p00156070

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00069p00156070	ERN19403	ERN19403

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-26	91.4	265	302

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDlrtgvllks 38
           gHt sv +l   + +++ sGs D+tikvWDl+t  +l++
   Q: 265  GHTRSVVSLVV-GlKRIYSGSMDNTIKVWDLDTLQCLQT 302
           79999999866.5589*******************9986 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MDLDVVNNGG NKRMYHRAQQ NERPSKVCYY WLEGRCTREN CKFLHGELPS SNGFSQKRSL 60
QPIEERISHA TSAGPRRGMP LKWFRGQGDR QGDAAPIENR RKVQNKICTY WIAGNCRLGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCTCG ACGTTGTTAA TAATGGAGGG AATAAGAGGA TGTATCACCG TGCCCAACAA 60
AATGAGAGAC CGTCCAAAGT TTGTTATTAC TGGTTAGAGG GTCGTTGTAC TCGAGAGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

KEGG

atr:18447787

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000399	Aegilops tauschii	44.98	6.00e-74	270.00
IUUC-Aly-005699	Arabidopsis lyrata	56.46	6.00e-147	512.00
IUUC-Ath-007001	Arabidopsis thaliana	57.08	9.00e-148	515.00
IUUC-Bdi-014857	Brachypodium distachyon	56.98	2.00e-142	497.00
IUUC-Bol-016382	Brassica oleracea	55.30	2.00e-143	501.00
IUUC-Bra-017102	Brassica rapa	56.94	4.00e-144	503.00
IUUC-Gma-042894	Glycine max	61.57	9.00e-148	515.00
IUUC-Hvu-047824	Hordeum vulgare	55.15	1.00e-107	382.00
IUUC-Lpe-051596	Leersia perrieri	48.84	5.00e-115	406.00
IUUC-Mtr-058068	Medicago truncatula	60.78	3.00e-144	503.00
IUUC-Mac-065071	Musa acuminata	62.59	5.00e-156	542.00
IUUC-Oba-075769	Oryza barthii	51.05	6.00e-117	412.00
IUUC-Obr-076011	Oryza brachyantha	56.95	2.00e-144	504.00
IUUC-Ogl-077192	Oryza glaberrima	57.44	5.00e-82	296.00
IUUC-Ogu-078248	Oryza glumaepatula	50.11	2.00e-118	417.00
IUUC-Oin-079981	Oryza indica	58.14	3.00e-144	503.00
IUUC-Olo-080571	Oryza longistaminata	50.25	3.00e-108	384.00
IUUC-Ome-081598	Oryza meridionalis	50.23	6.00e-117	412.00
IUUC-Oni-082711	Oryza nivara	50.47	3.00e-117	414.00
IUUC-Opu-083451	Oryza punctata	54.21	1.00e-140	491.00
IUUC-Oru-085129	Oryza rufipogon	51.06	2.00e-115	407.00
IUUC-Osa-085619	Oryza sativa	53.41	7.00e-99	352.00
IUUC-Ppa-095826	Physcomitrella patens	47.29	1.00e-110	392.00
IUUC-Pop-099994	Populus trichocarpa	55.33	3.00e-143	500.00
IUUC-Ppe-101609	Prunus persica	61.02	1.00e-157	547.00
IUUC-Smo-108900	Selaginella moellendorffii	46.33	3.00e-99	353.00
IUUC-Sit-109731	Setaria italica	57.58	2.00e-137	481.00
IUUC-Sly-111514	Solanum lycopersicum	54.76	3.00e-131	460.00
IUUC-Stu-112646	Solanum tuberosum	55.56	3.00e-138	483.00
IUUC-Sbi-114748	Sorghum bicolor	57.31	1.00e-138	485.00
IUUC-Tca-121658	Theobroma cacao	56.03	8.00e-136	475.00
IUUC-Tae-125577	Triticum aestivum	57.21	2.00e-142	497.00
IUUC-Tur-126095	Triticum urartu	49.16	2.00e-77	282.00
IUUC-Vvi-131444	Vitis vinifera	61.04	2.00e-157	546.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence